module FishersExactTest (pCutoff) where
import Data.Ratio
import Data.List (transpose)
pCutoff = toRatio . rpCutoff
rpCutoff rows =
facproduct (rs ++ cs) `rdivide` facproduct (n:xs)
where
rs = map sum rows
cs = map sum (transpose rows)
n = sum rs
xs = concat rows -- cells
facproduct = rproduct . map fac
fac n | n < 2 = runit
| otherwise = R [2..n] []
-- I represent numbers as ratios of products of integer streams
-- R [1,2,3] [4,5] === (1 * 2 * 3) / (4 * 5)
data Rops = R { numer :: [Int], denom :: [Int] } deriving Show
runit = R [] [] -- the number 1
toRatio (R ns ds) = bigProduct ns % bigProduct ds
bigProduct = product . map toInteger
-- multiplication is merging numerator and denominator streams
-- and then canceling the first by the second
rtimes (R xns xds) (R yns yds) =
uncurry R $ (merge xns yns) `cancel` (merge xds yds)
rproduct = foldr rtimes runit
-- division is multiplication by the inverse
rdivide x (R yns yds) = rtimes x (R yds yns)
-- helpers
merge (x:xs) (y:ys)
| x < y = x : merge xs (y:ys)
| otherwise = y : merge (x:xs) ys
merge [] ys = ys
merge xs [] = xs
cancel (x:xs) (y:ys)
| x == y = cancel xs ys
| x < y = let (xs', ys') = cancel xs (y:ys) in (x:xs', ys')
| otherwise = let (xs', ys') = cancel (x:xs) ys in (xs', y:ys')
cancel xs ys = (xs, ys)