Sorry, I don't trully understand the question.
But the asnwer is the same :) Use DB, build index on the files, content and use SQL:LIKE to extract.
HINT:
TABLE STRUCTURE:
ID(PRIMARY KEY,LONG)
FILE_NAME(TEXT)
STR_NUMBER(LONG) # - STRING NUMBER IN FILE
STR_DATA(TEXT) # - STRING ¹ STR_NUMBER FROM FILE_NAME
AND SQL: SELECT FILE_NAME, STR_NUMBER FROM TABLE WHERE (place UCASE here if DB casedependent)STR_DATA LIKE %REGEXP_HERE%
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