in reply to Defining directory/Datas the perl script should work with
"I think there a lot of syntax errors ...
Welcome. Your running with strict, warnings and diagnostics, perl will tell you about problems.
my $dir = "usr/bin/Test_Protokoll"
Should be:
my $dir = "usr/bin/Test_Protokoll";
If this is the same bet you're talking about, you need to specify the output path/file, bet input.file outdir/out.file -m. You'll also have seen:
"Numeric variables with more than one digit may not start with '0' at bet.pl line 9 (#1)"
So don't do that. You improperly create @filter and then never use it. Consider:
#!/usr/bin/perl use strict; use warnings; use diagnostics; my $dir = 'usr/bin/Test_Protokoll'; my @filters = ('001', '002', '003'); foreach my $filter ( @filters ){ print "filter: $filter\n"; system("bet SYNT_MPRAGE_T1_PD_B0corr YNT_MPRAGE_T1_PD_B0corr_brain + -m"); }
You don't say what you want to do with these filters, and perhaps you want to include $dir as the output path to your bet call. See also $?
|
---|
Replies are listed 'Best First'. | |
---|---|
Re^2: Defining directory/Datas the perl script should work with
by karlgoethebier (Abbot) on Oct 21, 2021 at 14:35 UTC | |
by Anonymous Monk on Oct 21, 2021 at 15:24 UTC | |
by karlgoethebier (Abbot) on Oct 21, 2021 at 17:34 UTC | |
Re^2: Defining directory/Datas the perl script should work with
by perlnewbie (Novice) on Oct 22, 2021 at 08:10 UTC |
In Section
Seekers of Perl Wisdom