tr => q[ ( my $revcmp = reverse $seq ) =~ tr[ACGTacgt][tgcaTGCA]; ], C:\test>junk60 Rate hdb atcroft davido tr hdb 9827/s -- -36% -71% -100% atcroft 15292/s 56% -- -55% -99% davido 33822/s 244% 121% -- -99% tr 2640400/s 26770% 17167% 7707% --