Query= sp|P30443|1A01_HUMAN HLA class I histocompatibility antigen,
A-1 alpha chain OS=Homo sapiens GN=HLA-A PE=1 SV=1
         (365 letters)



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|G1KTN1|G1KTN1_ANOCA Uncharacterized protein OS=Anolis carolin...   242   1e-77
tr|L7MZX2|L7MZX2_ANOCA Uncharacterized protein OS=Anolis carolin...   239   2e-76
tr|H9GR57|H9GR57_ANOCA Uncharacterized protein (Fragment) OS=Ano...   236   4e-75
tr|L7MZP5|L7MZP5_ANOCA Uncharacterized protein OS=Anolis carolin...   233   3e-74
tr|H9G3Y5|H9G3Y5_ANOCA Uncharacterized protein OS=Anolis carolin...   231   1e-73
tr|H9GBT0|H9GBT0_ANOCA Uncharacterized protein (Fragment) OS=Ano...   232   2e-73
tr|H9GTB3|H9GTB3_ANOCA Uncharacterized protein (Fragment) OS=Ano...   220   3e-69
tr|H9GSQ9|H9GSQ9_ANOCA Uncharacterized protein OS=Anolis carolin...   218   2e-68
tr|L7MZR7|L7MZR7_ANOCA Uncharacterized protein (Fragment) OS=Ano...   213   4e-66
tr|H9GRY4|H9GRY4_ANOCA Uncharacterized protein (Fragment) OS=Ano...   209   2e-65
tr|H9GBL3|H9GBL3_ANOCA Uncharacterized protein OS=Anolis carolin...   206   5e-64
>tr|G1KTN1|G1KTN1_ANOCA Uncharacterized protein OS=Anolis
           carolinensis PE=3 SV=2
          Length = 358

 Score =  242 bits (618), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 131/280 (46%), Positives = 175/280 (62%), Gaps = 8/280 (2%)

Query: 24  AGSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQKMEPRAPWI---EQEG 80
           + SHSMRYF TSVS PG+  P+F  VGYVDD +FV ++  A++++  P+ PWI   E+  
Sbjct: 25  SSSHSMRYFVTSVSEPGQQVPQFSYVGYVDDQEFVSYN--ASTRRYLPKVPWISKVEKND 82

Query: 81  PEYWDQETRNMKAHSQTDRANLGTLRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQD 140
           P+YW++ T   + H ++ R +L TL  YYNQS  G HT Q MYGC++  D     GY Q 
Sbjct: 83  PDYWERNTLYAQGHERSFRDHLATLAEYYNQS-GGLHTFQWMYGCELRNDWS-KGGYYQY 14


>tr|L7MZX2|L7MZX2_ANOCA Uncharacterized protein OS=Anolis
           carolinensis GN=LOC100559978 PE=3 SV=1
          Length = 364

 Score =  239 bits (611), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 130/274 (47%), Positives = 176/274 (64%), Gaps = 8/274 (2%)

Query: 30  RYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQKMEPRAPWI---EQEGPEYWDQ 86
           RY +TSVS PG+ EP+F +VGYVD+ +FV +DS A  ++  P  PWI   E+E PEYW+Q
Sbjct: 32  RYVYTSVSEPGQQEPQFFSVGYVDEQEFVSYDSKA--KRRFPAVPWIRKVEEEDPEYWEQ 89


##</code><code>##

#!/usr/bin/perl
use warnings;
use strict;
use diagnostics;
my $file=$ARGV[0];
open (FILE,$file);
while(<FILE>)
{
my @query=$_;
foreach my $a (@query)
{
	next until $a=~/^Query=.*$/;
	if($a=~/^Query=\s([^\s]+)\s.*$/)
	{
	print "$1\t";
	next until $a=~/^>.+$/;
	if($a=~/^>([^\s]+)\s.*$/)
	{
	print "$1\n";
	}
	}	
}
}