my $count = $result_buffer->{$id}->{$pwm};


##</code><code>##

 my $count = count_pwm_num($pwm,$seq_1,$seq_2);


##</code><code>##

if($count != 0) {
     $output_temp_handle->print($id);
     $output_temp_handle->print("\t$pwm\t1\n");
}
else {
     $output_temp_handle->print($id);
     $output_temp_handle->print("\t$pwm\t0\n");
}


##</code><code>##

$pm->start and next PWM;