######################################################### # Perl code to get complete sequence in FASTA format from GenBank page ######################################################### #!/usr/bin/perl use warnings; use strict; use Bio::DB::GenBank; use Bio::SeqIO; my $gb =new Bio::DB::GenBank; my $acc="NM_021817"; my $seq1=$gb->get_Seq_by_acc($acc); my $sequence=$seq1->seq(); my $description=$seq1->desc(); print "\n $description $sequence\n"; exit; #### C:\Users\Desktop>seq.pl Homo sapiens hyaluronan and proteoglycan link protein 2 (HAPLN2), mRNA. TTGCCATTACCCACAGAATAAAGAAAGGGGCCCTGTTATTCAACAATAGGGGAAAAGACAGAGACAATGGGAAATTGTGC TTCCGATGGGGTGGGGACTGAGAAGGAAAGGACAGACAGACAGACAGACAGGGGGTTGTACAGAAGAGGTCCGGTTTCTT GAAGCAGCTGGAAGTCCTGGATAGTTCCCACCTGAAAGTCTGTTTGCAAAGGCAATGCGCACTCAGGCACCAGAGGGCAG AGGGGCTCAAGTTCCAGGGTTTTAAGGTGCTTGGAACTCCCAGGAGCCTGGCAAACCTTCATCCAGAACCTCTTCCTCAA GCAAGACAAAAAGCTGCTAAGCACTGCTCCCTCCGTCTCTGTGAAGAGACCAGCTTCTAACAGACGGTGCCGGGCTGACC CCCCATCATGCCAGGCTGGCTCACCCTCCCCACACTCTGCCGCTTCCTTCTTTGGGCCTTCACCATCTTCCACAAAGCCC AAGGAGACCCAGCATCCCACCCGGGCCCCCACTACCTCCTGCCCCCCATCCACGAGGTCATTCACTCTCATCGTGGGGCC ACGGCCACGCTGCCCTGCGTCCTGGGCACCACGCCTCCCAGCTACAAGGTGCGCTGGAGCAAGGTGGAGCCTGGGGAGCT CCGGGAAACGCTGATCCTCATCACCAACGGACTGCACGCCCGGGGGTATGGGCCCCTGGGAGGGCGCGCCAGGATGCGGA GGGGGCATCGACTAGACGCCTCCCTGGTCATCGCGGGCGTGCGCCTGGAGGACGAGGGCCGGTACCGCTGCGAGCTCATC AACGGCATCGAGGACGAGAGCGTGGCGCTGACCTTGAGCTTGGAGGGTGTGGTGTTTCCGTACCAACCCAGCCGGGGCCG GTACCAGTTCAATTACTACGAGGCGAAGCAGGCGTGCGAGGAGCAGGACGGACGCCTGGCCACCTACTCCCAGCTCTACC AGGCTTGGACCGAGGGTCTGGACTGGTGTAACGCGGGCTGGCTGCTCGAGGGCTCCGTGCGCTACCCTGTGCTCACCGCA CGCGCCCCGTGCGGCGGCCGAGGCCGGCCCGGGATCCGCAGCTACGGACCCCGCGACCGGATGCGCGACCGCTACGACGC CTTCTGCTTCACCTCCGCGCTGGCGGGCCAAGTGTTCTTCGTGCCCGGGCGGCTGACGCTGTCTGAAGCCCACGCGGCGT GCCGGCGACGCGGCGCCGTGGTGGCCAAGGTTGGGCACCTCTACGCCGCCTGGAAGTTTTCGGGGCTAGACCAGTGCGAC GGCGGCTGGCTGGCTGACGGCAGTGTGCGCTTCCCAATCACCACGCCGAGGCCGCGCTGCGGGGGGCTCCCGGATCCCGG AGTGCGCAGTTTCGGCTTCCCCAGGCCCCAACAGGCAGCCTATGGGACCTACTGCTACGCCGAGAATTAGGCGCCCACCG TGTCCCCTCCAGCGCGCGCGAAGAAGCTTGGGAGTCGTGGCGGGGGTCTCTCGCCACCCCTTTCCGGAGAGCCTCCCCTC CCTCCAGACCCGGAGCGGCCTCTCCAGACCTGCCTTCCCAGCCGGGGGCTGCGGGCCTCGGACCCCGGCTGGCCCGGCGG CGGGGAGGGGAGGCGGGGGCGCCTCCGGCGGCGAGATGCAGAGGTGACCCTCGGACCCGCTGCCGTTCGCGAACCCTAGC AGAGGACTCAGCCACCGCCGGGGGGAGGGTGAGGCGGCCGGGGGCATTAACTGACCTCTGAGTACAGCAATAAAATAACC TGGGGATCTTTAAAAAAAAAAAAAAAAAAAAAAAA C:\Users\Desktop> #### >NM_021817.2:408-1430 Homo sapiens hyaluronan and proteoglycan link protein 2 (HAPLN2), mRNA ATGCCAGGCTGGCTCACCCTCCCCACACTCTGCCGCTTCCTTCTTTGGGCCTTCACCATCTTCCACAAAG CCCAAGGAGACCCAGCATCCCACCCGGGCCCCCACTACCTCCTGCCCCCCATCCACGAGGTCATTCACTC TCATCGTGGGGCCACGGCCACGCTGCCCTGCGTCCTGGGCACCACGCCTCCCAGCTACAAGGTGCGCTGG AGCAAGGTGGAGCCTGGGGAGCTCCGGGAAACGCTGATCCTCATCACCAACGGACTGCACGCCCGGGGGT ATGGGCCCCTGGGAGGGCGCGCCAGGATGCGGAGGGGGCATCGACTAGACGCCTCCCTGGTCATCGCGGG CGTGCGCCTGGAGGACGAGGGCCGGTACCGCTGCGAGCTCATCAACGGCATCGAGGACGAGAGCGTGGCG CTGACCTTGAGCTTGGAGGGTGTGGTGTTTCCGTACCAACCCAGCCGGGGCCGGTACCAGTTCAATTACT ACGAGGCGAAGCAGGCGTGCGAGGAGCAGGACGGACGCCTGGCCACCTACTCCCAGCTCTACCAGGCTTG GACCGAGGGTCTGGACTGGTGTAACGCGGGCTGGCTGCTCGAGGGCTCCGTGCGCTACCCTGTGCTCACC GCACGCGCCCCGTGCGGCGGCCGAGGCCGGCCCGGGATCCGCAGCTACGGACCCCGCGACCGGATGCGCG ACCGCTACGACGCCTTCTGCTTCACCTCCGCGCTGGCGGGCCAAGTGTTCTTCGTGCCCGGGCGGCTGAC GCTGTCTGAAGCCCACGCGGCGTGCCGGCGACGCGGCGCCGTGGTGGCCAAGGTTGGGCACCTCTACGCC GCCTGGAAGTTTTCGGGGCTAGACCAGTGCGACGGCGGCTGGCTGGCTGACGGCAGTGTGCGCTTCCCAA TCACCACGCCGAGGCCGCGCTGCGGGGGGCTCCCGGATCCCGGAGTGCGCAGTTTCGGCTTCCCCAGGCC CCAACAGGCAGCCTATGGGACCTACTGCTACGCCGAGAATTAG