ID ARF1_PLAFA Reviewed; 181 AA. AC Q94650; O02502; O02593; DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot. DT 23-JAN-2007, sequence version 3. DT 25-NOV-2008, entry version 52. DE RecName: Full=ADP-ribosylation factor 1; GN Name=ARF1; Synonyms=ARF, PLARF; OS Plasmodium falciparum. OC Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; OC Plasmodium; Plasmodium (Laverania). OX NCBI_TaxID=5833; RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RC STRAIN=T9/96; TISSUE=Blood; RX MEDLINE=97112480; PubMed=8954160; RX DOI=10.1111/j.1432-1033.1996.0104r.x; RA Stafford W.H., Stockley R.W., Ludbrook S.B., Holder A.A.; RT "Isolation, expression and characterization of the gene for an AD +P- RT ribosylation factor from the human malaria parasite, Plasmodium RT falciparum."; RL Eur. J. Biochem. 242:104-113(1996). RN [2] RP NUCLEOTIDE SEQUENCE [MRNA]. RX MEDLINE=97237566; PubMed=9084044; DOI=10.1016/S0166-6851(96)02803 +-4; RA Truong R.M., Francis S.E., Chakrabarti D., Goldberg D.E.; RT "Cloning and characterization of Plasmodium falciparum ADP- RT ribosylation factor and factor-like genes."; RL Mol. Biochem. Parasitol. 84:247-253(1997). CC -!- FUNCTION: GTP-binding protein that functions as an allosteric CC activator of the cholera toxin catalytic subunit, an ADP- CC ribosyltransferase. Involved in protein trafficking; may modu +late CC vesicle budding and uncoating within the Golgi apparatus (By CC similarity). CC -!- SUBCELLULAR LOCATION: Golgi apparatus (By similarity). CC -!- SIMILARITY: Belongs to the small GTPase superfamily. Arf fami +ly. CC ----------------------------------------------------------------- +------ CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org +/terms CC Distributed under the Creative Commons Attribution-NoDerivs Licen +se CC ----------------------------------------------------------------- +------ DR EMBL; Z80359; CAB02498.1; -; Genomic_DNA. DR EMBL; U57370; AAB63304.1; -; mRNA. DR HSSP; P32889; 1RRF. DR SMR; Q94650; 6-179. DR GO; GO:0005794; C:Golgi apparatus; IEA:UniProtKB-KW. DR GO; GO:0005525; F:GTP binding; IEA:InterPro. DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW. DR GO; GO:0007264; P:small GTPase mediated signal transduction; IEA: +InterPro. DR GO; GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW. DR InterPro; IPR006688; ARF. DR InterPro; IPR006689; ARF/SAR. DR InterPro; IPR001806; Ras_trnsfrmng. DR InterPro; IPR005225; Small_GTP_bd. DR PANTHER; PTHR11711; ARF/SAR; 1. DR Pfam; PF00025; Arf; 1. DR PRINTS; PR00449; RASTRNSFRMNG. DR PRINTS; PR00328; SAR1GTPBP. DR SMART; SM00177; ARF; 1. DR TIGRFAMs; TIGR00231; small_GTP; 1. DR PROSITE; PS01019; ARF; 1. PE 2: Evidence at transcript level; KW ER-Golgi transport; Golgi apparatus; GTP-binding; Lipoprotein; KW Myristate; Nucleotide-binding; Protein transport; Transport. FT INIT_MET 1 1 Removed (Potential). FT CHAIN 2 181 ADP-ribosylation factor 1. FT /FTId=PRO_0000207447. FT NP_BIND 24 31 GTP (By similarity). FT NP_BIND 67 71 GTP (By similarity). FT NP_BIND 126 129 GTP (By similarity). FT LIPID 2 2 N-myristoyl glycine (Potential). SQ SEQUENCE 181 AA; 20912 MW; 18013B069BEA2413 CRC64; MGLYVSRLFN RLFQKKDVRI LMVGLDAAGK TTILYKVKLG EVVTTIPTIG FNVETVEFRN ISFTVWDVGG QDKIRPLWRH YYSNTDGLIF VVDSNDRERI DDAREELHRM INEEELKDAI ILVFANKQDL PNAMSAAEVT EKLHLNTIRE RNWFIQSTCA TRGDGLYEGF DWLTTHLNNA K #### >NM_012514 | Rattus norvegicus | breast cancer 1 (Brca1) | mRNA CGCTGGTGCAACTCGAAGACCTATCTCCTTCCCGGGGGGGCTTCTCCGGCATTTAGGCCT CGGCGTTTGGAAGTACGGAGGTTTTTCTCGGAAGAAAGTTCACTGGAAGTGGAAGAAATG GATTTATCTGCTGTTCGAATTCAAGAAGTACAAAATGTCCTTCATGCTATGCAGAAAATC TTGGAGTGTCCAATCTGTTTGGAACTGATCAAAGAACCGGTTTCCACACAGTGCGACCAC ATATTTTGCAAATTTTGTATGCTGAAACTCCTTAACCAGAAGAAAGGACCTTCCCAGTGT CCTTTGTGTAAGAATGAGATAACCAAAAGGAGCCTACAAGGAAGTGCAAGG #### #!/usr/bin/perl use warnings; use strict; unless (open(UNIPROT, "<", "uniprotfile")) { die "Unable to open uniprot file", $!; } while () { my $lines = $_; if ($lines =~ /^AC\s+(.*)\;|^OS\s+(.*)|^OX\s+(.*)|^ID\s+(.*)|^GN\s+(.*)/) print $1, $2, $3, $4, $5, "\n"; } #### Use of uninitialized value $1 in print at ./file.pl line 11, line 1. Use of uninitialized value $2 in print at ./file.pl line 11, line 1. Use of uninitialized value $3 in print at ./file.pl line 11, line 1. Use of uninitialized value $5 in print at ./file.pl line 11, line 1. CERU_HUMAN STANDARD; PRT; 1065 AA. Use of uninitialized value $2 in print at ./file.pl line 11, line 2. Use of uninitialized value $3 in print at ./file.pl line 11, line 2. Use of uninitialized value $4 in print at ./file.pl line 11, line 2. Use of uninitialized value $5 in print at ./file.pl line 11, line 2. P00450; Q14063 Use of uninitialized value $1 in print at ./file.pl line 11, line 7. Use of uninitialized value $2 in print at ./file.pl line 11, line 7. Use of uninitialized value $3 in print at ./file.pl line 11, line 7. Use of uninitialized value $4 in print at ./file.pl line 11, line 7. CP. Use of uninitialized value $1 in print at ./file.pl line 11, line 8. Use of uninitialized value $3 in print at ./file.pl line 11, line 8. Use of uninitialized value $4 in print at ./file.pl line 11, line 8. Use of uninitialized value $5 in print at ./file.pl line 11, line 8. Homo sapiens (Human). Use of uninitialized value $1 in print at ./file.pl line 11, line 11. Use of uninitialized value $2 in print at ./file.pl line 11, line 11. Use of uninitialized value $4 in print at ./file.pl line 11, line 11. Use of uninitialized value $5 in print at ./file.pl line 11, line 11. NCBI_TaxID=9606;