# Output from 'compseq' # # The Expected frequencies are calculated on the (false) assumption that every # word has equal frequency. # # The input sequences are: # 2L Word size 1 Total count 48795086 # # Word Obs Count Obs Frequency Exp Frequency Obs/Exp Frequency # A 13340410 0.2733966 0.2500000 1.0935864 C 10686861 0.2190151 0.2500000 0.8760604 G 10692025 0.2191209 0.2500000 0.8764838 T 13352116 0.2736365 0.2500000 1.0945460 Other 723674 0.0148309 0.0000000 10000000000.0000000 #### $compseqOutput =~ m/Total\scount\s+(\d+).+? C\s+(\d+).+? G\s+(\d+).+? (?:Other\s+(\d+))?/sx #### $compseqOutput =~ m/Total\scount\s+(\d+).+? C\s+(\d+).+? G\s+(\d+).+? Other\s+(\d+)/sx