To command line Pathway is 1 Gene: YAL038W, Value: 1 Gene: YDL188C, Value: 1 Pathway is 2 Pathway is 4 Gene:YAL038W, Value: 4.1 Pathway is 99 Done. And in the file OUTPUT: YAL038W 1 YDL188C 1 YAL038W 4