#! perl -slw
use strict;
our $LEN ||= 10;
my $s = 'A' x $LEN;
print $s;
for my $p1 ( 0 .. $LEN -1 ) {
for my $c1 ( qw[ C G T ] ) {
for my $p2 ( $p1 .. $LEN -1 ) {
next if $p1 == $p2;
for my $c2 ( qw[ C G T ] ) {
my $t = $s;
substr $t, $p1, 1, $c1;
substr $t, $p2, 1, $c2;
print $t;
}
}
}
}
__END__
P:\test\demerphq>keyGen -LEN=10 >test.words
P:\test\demerphq>wc -l test.words
406 test.words
####
P:\test\demerphq>u:head test.words
AAAAAAAAAA
CCAAAAAAAA
CGAAAAAAAA
CTAAAAAAAA
CACAAAAAAA
CAGAAAAAAA
CATAAAAAAA
CAACAAAAAA
CAAGAAAAAA
CAATAAAAAA
P:\test\demerphq>u:tail test.words
AAAAAAATAT
AAAAAAAACC
AAAAAAAACG
AAAAAAAACT
AAAAAAAAGC
AAAAAAAAGG
AAAAAAAAGT
AAAAAAAATC
AAAAAAAATG
AAAAAAAATT
####
P:\test\demerphq>type test.seq
AAAAAAAAAAA
####
[11:37:48.89] P:\test\demerphq>TrieXor.orig.pl test.words test.seq
%#% 11:37:51 ### Start
%#% 11:37:51 ( 0.0048 : 0.0048) Finish
Total Elapsed Time: 0.00477910041809082 secs
%#% 11:37:51 ### Starting TRIE
%#% 11:37:51 ( 0.0029 : 0.0029) Got 406 to fuzzyify
%#% 11:37:52 ( 1.0381 : 1.0411) Fuzzy Words:16906 [39678 nodes in tree]
%#% 11:37:56 ( 4.7969 : 5.8380) Finised Traverse
%#% 11:37:56 ( 0.0000 : 5.8380) Finish
Total Elapsed Time: 5.83795619010925 secs
%#% 11:37:56 ### Starting Trie Scan
%#% 11:37:56 ( 0.0000 : 0.0000) TRIE #0001: 0002 > :
000000:AAAAAAAAAA:0, 000001:AAAAAAAAAA:0
%#% 11:37:56 ( 0.0000 : 0.0000) Trie Done
%#% 11:37:56 ( 0.0313 : 0.0313) Finish
Total Elapsed Time: 0.03125 secs
%#% 11:37:56 ### Starting xor_fuzz search
%#% 11:37:56 ( 0.0000 : 0.0000) xor_fuzz loading 'test.words'
%#% 11:37:56 ( 0.0000 : 0.0000) Loaded 406 10-ers
%#% 11:37:56 ( 0.0000 : 0.0000) XOR #0001: 0000 > :
000000:ACAAAAAAGA:2, 000000:GAAAATAAAA:2, 000000:CAACAAAAAA:2,
000000:AAAACAAAAC:2, 000000:AAACATAAAA:2, 000000:AACAATAAAA:2,
000000:AGAAAACAAA:2, 000000:ATGAAAAAAA:2, 000000:CAAAAATAAA:2,
000000:AAAAAGAATA:2, 000000:AATAAAAGAA:2, 000000:AAACAAAAAC:2,
000000:AAAAAAAGAT:2, 000000:AGAAAAAAAT:2, 000000:AAACAAACAA:2,
000000:AAAAAAAACG:2, 000000:AAAGAAACAA:2, 000000:ATACAAAAAA:2,
000000:AAAAACAACA:2, 000000:AAACAAAGAA:2, 000000:ACAAAGAAAA:2,
000000:AAACAAAAAT:2, 000000:TAAAAGAAAA:2, 000000:AAAAAATCAA:2,
000000:AAAAAATAAT:2, 000000:AAAACCAAAA:2, 000000:AAATAAAGAA:2,
000000:ATAAAAAACA:2, 000000:AAGAAATAAA:2, 000000:AAACCAAAAA:2,
000000:AAAAGGAAAA:2, 000000:AAGAAAGAAA:2, 000000:AAGTAAAAAA:2,
000000:AAAAAAGAAC:2, 000000:ACAAAAAATA:2, 000000:AACAAAATAA:2,
000000:AATGAAAAAA:2, 000000:ACTAAAAAAA:2, 000000:CAAAAAAAAC:2,
000000:AAAAAACGAA:2, 000000:AAATAAAAGA:2, 000000:GAAACAAAAA:2,
000000:AAAAGAAAGA:2, 000000:AAAATAAGAA:2, 000000:ACATAAAAAA:2,
000000:AAAGAAATAA:2, 000000:ATAAAAATAA:2, 000000:TAAAAAAAAT:2,
000000:AAAACATAAA:2, 000000:AAAAAAAAGG:2, 000000:AAAAAAAGAG:2,
000000:AAGAACAAAA:2, 000000:AAAAAAAATT:2, 000000:TAAAAAACAA:2,
000000:GAAATAAAAA:2, 000000:AAATCAAAAA:2, 000000:ACAAACAAAA:2,
000000:ACAATAAAAA:2, 000000:CAATAAAAAA:2, 000000:AAAAAAACCA:2,
000000:TAAAAAGAAA:2, 000000:ATAAAAAAAT:2, 000000:AAAAATTAAA:2,
000000:AGAAAAAATA:2, 000000:ACAACAAAAA:2, 000000:CAAAAAAACA:2,
000000:AAAAAAATGA:2, 000000:AAATAGAAAA:2, 000000:ACAAAAAAAC:2,
000000:AAAAACATAA:2, 000000:AAAAATAACA:2, 000000:GAAGAAAAAA:2,
000000:CAAAAAATAA:2, 000000:AAAAATAAAT:2, 000000:GACAAAAAAA:2,
000000:ATATAAAAAA:2, 000000:AAAAAACAAC:2, 000000:AAAAACACAA:2,
000000:AAAAACAGAA:2, 000000:TAAAAAAAGA:2, 000000:AAACAACAAA:2,
000000:TAAAAAAAAC:2, 000000:AACAAATAAA:2, 000000:AACCAAAAAA:2,
000000:AAAAAAGACA:2, 000000:AAAGAAAATA:2, 000000:CTAAAAAAAA:2,
000000:CAAAGAAAAA:2, 000000:AGTAAAAAAA:2, 000000:AAAAAAGAAG:2,
000000:CAAATAAAAA:2, 000000:ACAAAAACAA:2, 000000:AAAAACGAAA:2,
000000:AAAAAGCAAA:2, 000000:CAAAAGAAAA:2, 000000:AAGGAAAAAA:2,
000000:AAAAAAAATG:2, 000000:AAAATAACAA:2, 000000:AAAAAGAAAT:2,
000000:AATAAAGAAA:2, 000000:AACAAGAAAA:2, 000000:ATAAAGAAAA:2,
000000:AGAAAAAAGA:2, 000000:AAAAATAATA:2, 000000:AAAACACAAA:2,
000000:AGAGAAAAAA:2, 000000:AGACAAAAAA:2, 000000:AAAATAAAAC:2,
000000:AAAGAAAAGA:2, 000000:AAAAAAGATA:2, 000000:AAAAAAACGA:2,
000000:AAAGAATAAA:2, 000000:AAAAAAATAG:2, 000000:AAAATAATAA:2,
000000:TAGAAAAAAA:2, 000000:AACAAAAACA:2, 000000:GAAAAAAATA:2,
000000:AAAAAAAGAC:2, 000000:AAAATACAAA:2, 000000:GAAAAACAAA:2,
000000:AAAAAAATAT:2, 000000:AAAAGAGAAA:2, 000000:AAAGAAAAAC:2,
000000:AATAACAAAA:2, 000000:AAAAGAAAAT:2, 000000:AAATACAAAA:2,
000000:AAAAATAAAG:2, 000000:AAATGAAAAA:2, 000000:AAATAAAATA:2,
000000:AAAAAATGAA:2, 000000:AAAAAGAAAC:2, 000000:AAAAGAAAAC:2,
000000:AATAAAACAA:2, 000000:AAAAAAGAAT:2, 000000:AAAAAAAAGT:2,
000000:AAAAAGAGAA:2, 000000:AAAAACCAAA:2, 000000:CAAAAAAATA:2,
000000:TAAGAAAAAA:2, 000000:AAAAATAAGA:2, 000000:AAAAAACAAG:2,
000000:AAACGAAAAA:2, 000000:GAAAAAAAAT:2, 000000:AACATAAAAA:2,
000000:AAAGTAAAAA:2, 000000:CAGAAAAAAA:2, 000000:ACAAAAAGAA:2,
000000:AAAAAAAGCA:2, 000000:AAGACAAAAA:2, 000000:AAAGCAAAAA:2,
000000:ACAAAAATAA:2, 000000:CAAAACAAAA:2, 000000:AGAAAATAAA:2,
000000:AACAAAACAA:2, 000000:AAAAAAACAT:2, 000000:AGAAAAAGAA:2,
000000:ATAAAACAAA:2, 000000:AAAAATACAA:2, 000000:AAAAAAAGTA:2,
000000:TAAAACAAAA:2, 000000:ACAAAAAAAG:2, 000000:TAACAAAAAA:2,
000000:GAAAAAAAAC:2, 000000:GGAAAAAAAA:2, 000000:TAAAGAAAAA:2,
000000:AGAAGAAAAA:2, 000000:AAATTAAAAA:2, 000000:AAACAAAAGA:2,
000000:AAATAAAAAG:2, 000000:AATAAAAAGA:2, 000000:AAATAAAAAT:2,
000000:AAAGAACAAA:2, 000000:TATAAAAAAA:2, 000000:AAGAAAAAGA:2,
000000:AAAAAAAGGA:2, 000000:ATAAAAAATA:2, 000000:TAAAAACAAA:2,
000000:AACAGAAAAA:2, 000000:AAAAACAAAC:2, 000000:AAAAAAAATC:2,
000000:CAAAAAAAGA:2, 000000:AAAAAATAGA:2, 000000:AAAAAAATAC:2,
000000:GAGAAAAAAA:2, 000000:AAAAAGTAAA:2, 000000:AACAAAGAAA:2,
000000:AAACAAGAAA:2, 000000:ATAAAAGAAA:2, 000000:ACAAAACAAA:2,
000000:AAAAAAACAG:2, 000000:GAAAAATAAA:2, 000000:TAAAATAAAA:2,
000000:GAAAAAAGAA:2, 000000:ACAAAAAACA:2, 000000:AAAAGTAAAA:2,
000000:AATAAAAAAC:2, 000000:AAAAAACAGA:2, 000000:AAAGAAAACA:2,
000000:GAAAACAAAA:2, 000000:GAATAAAAAA:2, 000000:AGAAACAAAA:2,
000000:AAAAGAAAAG:2, 000000:AATTAAAAAA:2, 000000:GTAAAAAAAA:2,
000000:TAAAAATAAA:2, 000000:AAAATAAACA:2, 000000:TAAAAAAAAG:2,
000000:AAGAAAACAA:2, 000000:TAAAAAATAA:2, 000000:AGGAAAAAAA:2,
000000:CAAAAACAAA:2, 000000:AAAAGAAATA:2, 000000:ACAGAAAAAA:2,
000000:AAAGAAGAAA:2, 000000:AAAAACAATA:2, 000000:AAAGAAAGAA:2,
000000:AAAAAAACTA:2, 000000:AAGAATAAAA:2, 000000:AATAAGAAAA:2,
000000:AAAAATCAAA:2, 000000:TAAAAAAATA:2, 000000:AAAAAATAAG:2,
000000:AGAAAAGAAA:2, 000000:AATAAAAATA:2, 000000:AAATAAAACA:2,
000000:ATCAAAAAAA:2, 000000:ATAAAAAAAC:2, 000000:GAAAAAAAGA:2,
000000:ATAAGAAAAA:2, 000000:AACAAAAATA:2, 000000:AAAGGAAAAA:2,
000000:ACAAGAAAAA:2, 000000:CATAAAAAAA:2, 000000:AGAACAAAAA:2,
000000:AAGAAAAAAT:2, 000000:GAAAGAAAAA:2, 000000:AATAATAAAA:2,
000000:GAAAAAACAA:2, 000000:AAACACAAAA:2, 000000:GAAAAAATAA:2,
000000:AAAAACAAAT:2, 000000:AAACAAAACA:2, 000000:AATAAAAACA:2,
000000:AAAGACAAAA:2, 000000:AAAATAGAAA:2, 000000:AAAACAAGAA:2,
000000:AAAATTAAAA:2, 000000:AAAACAGAAA:2, 000000:AAAAACAAAG:2,
000000:ATAAACAAAA:2, 000000:AGCAAAAAAA:2, 000000:AACAACAAAA:2,
000000:AAAGAAAAAG:2, 000000:AAAAAACAAT:2, 000000:AAAAGAAACA:2,
000000:AAACTAAAAA:2, 000000:AACGAAAAAA:2, 000000:CGAAAAAAAA:2,
000000:AAATAATAAA:2, 000000:AATAAATAAA:2, 000000:AGAAAAACAA:2,
000000:AAGAAGAAAA:2, 000000:AATATAAAAA:2, 000000:AAACAGAAAA:2,
000000:GCAAAAAAAA:2, 000000:AAAAACAAGA:2, 000000:AGAATAAAAA:2,
000000:ATAAAAAAGA:2, 000000:AAATAAACAA:2, 000000:AAAAAAAACT:2,
000000:AAAAATAGAA:2, 000000:AAGAAACAAA:2, 000000:AAAAAACACA:2,
000000:AAAATAAAAT:2, 000000:CAAAAAAGAA:2, 000000:AAAATGAAAA:2,
000000:AGAAAAATAA:2, 000000:AAAGATAAAA:2, 000000:AAAAAATAAC:2,
000000:AAAACAAAGA:2, 000000:TCAAAAAAAA:2, 000000:AATAGAAAAA:2,
000000:AAACAAAAAG:2, 000000:AAAACAAAAT:2, 000000:AGAAAAAACA:2,
000000:ATAAAATAAA:2, 000000:ATAAAAAGAA:2, 000000:AACAAAAAAG:2,
000000:AAAAAGAACA:2, 000000:AAAAGCAAAA:2, 000000:AAAAAAGAGA:2,
000000:AAAAAAATCA:2, 000000:ATAGAAAAAA:2, 000000:AAAAAACTAA:2,
000000:AAAACAAATA:2, 000000:ACGAAAAAAA:2, 000000:AAGATAAAAA:2,
000000:AAAAAGACAA:2, 000000:AAAACTAAAA:2, 000000:AAGAAAAAAG:2,
000000:AATAAAAAAG:2, 000000:AAAAAAGGAA:2, 000000:ACACAAAAAA:2,
000000:AAAATAAATA:2, 000000:AAAATAAAGA:2, 000000:AGATAAAAAA:2,
000000:GAACAAAAAA:2, 000000:CAAAAAAAAG:2, 000000:ATAATAAAAA:2,
000000:AACAAACAAA:2, 000000:AAAAAACATA:2, 000000:TGAAAAAAAA:2,
000000:GAAAAGAAAA:2, 000000:AAAATCAAAA:2, 000000:AGAAAAAAAC:2,
000000:TAAACAAAAA:2, 000000:AACAAAAGAA:2, 000000:AAAAAGGAAA:2,
000000:AACACAAAAA:2, 000000:AAAAAATACA:2, 000000:AAAAATAAAC:2,
000000:AAATAAAAAC:2, 000000:AAAAAAGTAA:2, 000000:AATAAAAAAT:2,
000000:AAAACAATAA:2, 000000:AAAAAAGCAA:2, 000000:AGAAATAAAA:2,
000000:GAAAAAAAAG:2, 000000:AATACAAAAA:2, 000000:AATCAAAAAA:2,
000000:ACCAAAAAAA:2, 000000:CAAAAAGAAA:2, 000000:AAGAAAATAA:2,
000000:AATAAAATAA:2, 000000:ATAACAAAAA:2, 000000:AAAACGAAAA:2,
000000:GAAAAAGAAA:2, 000000:AAATAACAAA:2, 000000:ACAAAAAAAT:2,
000000:AAAAATATAA:2, 000000:AAATAAGAAA:2, 000000:CCAAAAAAAA:2,
000000:AACAAAAAAT:2, 000000:ATAAATAAAA:2, 000000:CAAGAAAAAA:2,
000000:AAACAAAATA:2, 000000:AAAAAAAACC:2, 000000:AAAAAGAAGA:2,
000000:AAAACAAAAG:2, 000000:ATAAAAAAAG:2, 000000:AAATAAATAA:2,
000000:TAATAAAAAA:2, 000000:CAAAATAAAA:2, 000000:AAAAAACCAA:2,
000000:TAAATAAAAA:2, 000000:AGAAAGAAAA:2, 000000:AAAGAAAAAT:2,
000000:AAAAAAACAC:2, 000000:AAAAAGATAA:2, 000000:AAGAAAAAAC:2,
000000:CAAACAAAAA:2, 000000:GAAAAAAACA:2, 000000:AAACAAATAA:2,
000000:AAGAAAAATA:2, 000000:AGAAAAAAAG:2, 000000:AAAAGACAAA:2,
000000:AAAAAGAAAG:2, 000000:AAAAAATTAA:2, 000000:AAAAAAAAGC:2,
000000:AAATATAAAA:2, 000000:AACAAAAAAC:2, 000000:AAAAAAATTA:2,
000000:AATAAACAAA:2, 000000:AAAGAGAAAA:2, 000000:AAAAAATATA:2,
000000:ACAAAAGAAA:2, 000000:AAGAAAAGAA:2, 000000:TAAAAAAGAA:2,
000000:GATAAAAAAA:2, 000000:AAAAGATAAA:2, 000000:ATTAAAAAAA:2,
000000:AAAAATGAAA:2, 000000:CAAAAAAAAT:2, 000000:AAGAGAAAAA:2,
000000:AAAATAAAAG:2, 000000:AAAAGAATAA:2, 000000:AAAAGAACAA:2,
000000:AACAAAAAGA:2, 000000:AACTAAAAAA:2, 000000:ACAAATAAAA:2,
000000:TTAAAAAAAA:2, 000000:AAAAACTAAA:2, 000000:AAGAAAAACA:2,
000000:AAGCAAAAAA:2, 000000:TACAAAAAAA:2, 000000:AAAAAAAAAA:0,
000000:TAAAAAAACA:2, 000000:AAAAGAAGAA:2, 000000:AAAATATAAA:2,
000000:ATAAAAACAA:2, 000000:ACAAAATAAA:2, 000000:AAAACAACAA:2,
000000:CAAAAAACAA:2, 000000:CACAAAAAAA:2, 000000:AAACAATAAA:2,
000000:AAAACAAACA:2, 000001:ACAAAAAAGA:2, 000001:GAAAATAAAA:2,
000001:CAACAAAAAA:2, 000001:AAAACAAAAC:2, 000001:AAACATAAAA:2,
000001:AACAATAAAA:2, 000001:AGAAAACAAA:2, 000001:ATGAAAAAAA:2,
000001:CAAAAATAAA:2, 000001:AAAAAGAATA:2, 000001:AATAAAAGAA:2,
000001:AAACAAAAAC:2, 000001:AAAAAAAGAT:2, 000001:AGAAAAAAAT:2,
000001:AAACAAACAA:2, 000001:AAAAAAAACG:2, 000001:AAAGAAACAA:2,
000001:ATACAAAAAA:2, 000001:AAAAACAACA:2, 000001:AAACAAAGAA:2,
000001:ACAAAGAAAA:2, 000001:AAACAAAAAT:2, 000001:TAAAAGAAAA:2,
000001:AAAAAATCAA:2, 000001:AAAAAATAAT:2, 000001:AAAACCAAAA:2,
000001:AAATAAAGAA:2, 000001:ATAAAAAACA:2, 000001:AAGAAATAAA:2,
000001:AAACCAAAAA:2, 000001:AAAAGGAAAA:2, 000001:AAGAAAGAAA:2,
000001:AAGTAAAAAA:2, 000001:AAAAAAGAAC:2, 000001:ACAAAAAATA:2,
000001:AACAAAATAA:2, 000001:AATGAAAAAA:2, 000001:ACTAAAAAAA:2,
000001:CAAAAAAAAC:2, 000001:AAAAAACGAA:2, 000001:AAATAAAAGA:2,
000001:GAAACAAAAA:2, 000001:AAAAGAAAGA:2, 000001:AAAATAAGAA:2,
000001:ACATAAAAAA:2, 000001:AAAGAAATAA:2, 000001:ATAAAAATAA:2,
000001:TAAAAAAAAT:2, 000001:AAAACATAAA:2, 000001:AAAAAAAAGG:2,
000001:AAAAAAAGAG:2, 000001:AAGAACAAAA:2, 000001:AAAAAAAATT:2,
000001:TAAAAAACAA:2, 000001:GAAATAAAAA:2, 000001:AAATCAAAAA:2,
000001:ACAAACAAAA:2, 000001:ACAATAAAAA:2, 000001:CAATAAAAAA:2,
000001:AAAAAAACCA:2, 000001:TAAAAAGAAA:2, 000001:ATAAAAAAAT:2,
000001:AAAAATTAAA:2, 000001:AGAAAAAATA:2, 000001:ACAACAAAAA:2,
000001:CAAAAAAACA:2, 000001:AAAAAAATGA:2, 000001:AAATAGAAAA:2,
000001:ACAAAAAAAC:2, 000001:AAAAACATAA:2, 000001:AAAAATAACA:2,
000001:GAAGAAAAAA:2, 000001:CAAAAAATAA:2, 000001:AAAAATAAAT:2,
000001:GACAAAAAAA:2, 000001:ATATAAAAAA:2, 000001:AAAAAACAAC:2,
000001:AAAAACACAA:2, 000001:AAAAACAGAA:2, 000001:TAAAAAAAGA:2,
000001:AAACAACAAA:2, 000001:TAAAAAAAAC:2, 000001:AACAAATAAA:2,
000001:AACCAAAAAA:2, 000001:AAAAAAGACA:2, 000001:AAAGAAAATA:2,
000001:CTAAAAAAAA:2, 000001:CAAAGAAAAA:2, 000001:AGTAAAAAAA:2,
000001:AAAAAAGAAG:2, 000001:CAAATAAAAA:2, 000001:ACAAAAACAA:2,
000001:AAAAACGAAA:2, 000001:AAAAAGCAAA:2, 000001:CAAAAGAAAA:2,
000001:AAGGAAAAAA:2, 000001:AAAAAAAATG:2, 000001:AAAATAACAA:2,
000001:AAAAAGAAAT:2, 000001:AATAAAGAAA:2, 000001:AACAAGAAAA:2,
000001:ATAAAGAAAA:2, 000001:AGAAAAAAGA:2, 000001:AAAAATAATA:2,
000001:AAAACACAAA:2, 000001:AGAGAAAAAA:2, 000001:AGACAAAAAA:2,
000001:AAAATAAAAC:2, 000001:AAAGAAAAGA:2, 000001:AAAAAAGATA:2,
000001:AAAAAAACGA:2, 000001:AAAGAATAAA:2, 000001:AAAAAAATAG:2,
000001:AAAATAATAA:2, 000001:TAGAAAAAAA:2, 000001:AACAAAAACA:2,
000001:GAAAAAAATA:2, 000001:AAAAAAAGAC:2, 000001:AAAATACAAA:2,
000001:GAAAAACAAA:2, 000001:AAAAAAATAT:2, 000001:AAAAGAGAAA:2,
000001:AAAGAAAAAC:2, 000001:AATAACAAAA:2, 000001:AAAAGAAAAT:2,
000001:AAATACAAAA:2, 000001:AAAAATAAAG:2, 000001:AAATGAAAAA:2,
000001:AAATAAAATA:2, 000001:AAAAAATGAA:2, 000001:AAAAAGAAAC:2,
000001:AAAAGAAAAC:2, 000001:AATAAAACAA:2, 000001:AAAAAAGAAT:2,
000001:AAAAAAAAGT:2, 000001:AAAAAGAGAA:2, 000001:AAAAACCAAA:2,
000001:CAAAAAAATA:2, 000001:TAAGAAAAAA:2, 000001:AAAAATAAGA:2,
000001:AAAAAACAAG:2, 000001:AAACGAAAAA:2, 000001:GAAAAAAAAT:2,
000001:AACATAAAAA:2, 000001:AAAGTAAAAA:2, 000001:CAGAAAAAAA:2,
000001:ACAAAAAGAA:2, 000001:AAAAAAAGCA:2, 000001:AAGACAAAAA:2,
000001:AAAGCAAAAA:2, 000001:ACAAAAATAA:2, 000001:CAAAACAAAA:2,
000001:AGAAAATAAA:2, 000001:AACAAAACAA:2, 000001:AAAAAAACAT:2,
000001:AGAAAAAGAA:2, 000001:ATAAAACAAA:2, 000001:AAAAATACAA:2,
000001:AAAAAAAGTA:2, 000001:TAAAACAAAA:2, 000001:ACAAAAAAAG:2,
000001:TAACAAAAAA:2, 000001:GAAAAAAAAC:2, 000001:GGAAAAAAAA:2,
000001:TAAAGAAAAA:2, 000001:AGAAGAAAAA:2, 000001:AAATTAAAAA:2,
000001:AAACAAAAGA:2, 000001:AAATAAAAAG:2, 000001:AATAAAAAGA:2,
000001:AAATAAAAAT:2, 000001:AAAGAACAAA:2, 000001:TATAAAAAAA:2,
000001:AAGAAAAAGA:2, 000001:AAAAAAAGGA:2, 000001:ATAAAAAATA:2,
000001:TAAAAACAAA:2, 000001:AACAGAAAAA:2, 000001:AAAAACAAAC:2,
000001:AAAAAAAATC:2, 000001:CAAAAAAAGA:2, 000001:AAAAAATAGA:2,
000001:AAAAAAATAC:2, 000001:GAGAAAAAAA:2, 000001:AAAAAGTAAA:2,
000001:AACAAAGAAA:2, 000001:AAACAAGAAA:2, 000001:ATAAAAGAAA:2,
000001:ACAAAACAAA:2, 000001:AAAAAAACAG:2, 000001:GAAAAATAAA:2,
000001:TAAAATAAAA:2, 000001:GAAAAAAGAA:2, 000001:ACAAAAAACA:2,
000001:AAAAGTAAAA:2, 000001:AATAAAAAAC:2, 000001:AAAAAACAGA:2,
000001:AAAGAAAACA:2, 000001:GAAAACAAAA:2, 000001:GAATAAAAAA:2,
000001:AGAAACAAAA:2, 000001:AAAAGAAAAG:2, 000001:AATTAAAAAA:2,
000001:GTAAAAAAAA:2, 000001:TAAAAATAAA:2, 000001:AAAATAAACA:2,
000001:TAAAAAAAAG:2, 000001:AAGAAAACAA:2, 000001:TAAAAAATAA:2,
000001:AGGAAAAAAA:2, 000001:CAAAAACAAA:2, 000001:AAAAGAAATA:2,
000001:ACAGAAAAAA:2, 000001:AAAGAAGAAA:2, 000001:AAAAACAATA:2,
000001:AAAGAAAGAA:2, 000001:AAAAAAACTA:2, 000001:AAGAATAAAA:2,
000001:AATAAGAAAA:2, 000001:AAAAATCAAA:2, 000001:TAAAAAAATA:2,
000001:AAAAAATAAG:2, 000001:AGAAAAGAAA:2, 000001:AATAAAAATA:2,
000001:AAATAAAACA:2, 000001:ATCAAAAAAA:2, 000001:ATAAAAAAAC:2,
000001:GAAAAAAAGA:2, 000001:ATAAGAAAAA:2, 000001:AACAAAAATA:2,
000001:AAAGGAAAAA:2, 000001:ACAAGAAAAA:2, 000001:CATAAAAAAA:2,
000001:AGAACAAAAA:2, 000001:AAGAAAAAAT:2, 000001:GAAAGAAAAA:2,
000001:AATAATAAAA:2, 000001:GAAAAAACAA:2, 000001:AAACACAAAA:2,
000001:GAAAAAATAA:2, 000001:AAAAACAAAT:2, 000001:AAACAAAACA:2,
000001:AATAAAAACA:2, 000001:AAAGACAAAA:2, 000001:AAAATAGAAA:2,
000001:AAAACAAGAA:2, 000001:AAAATTAAAA:2, 000001:AAAACAGAAA:2,
000001:AAAAACAAAG:2, 000001:ATAAACAAAA:2, 000001:AGCAAAAAAA:2,
000001:AACAACAAAA:2, 000001:AAAGAAAAAG:2, 000001:AAAAAACAAT:2,
000001:AAAAGAAACA:2, 000001:AAACTAAAAA:2, 000001:AACGAAAAAA:2,
000001:CGAAAAAAAA:2, 000001:AAATAATAAA:2, 000001:AATAAATAAA:2,
000001:AGAAAAACAA:2, 000001:AAGAAGAAAA:2, 000001:AATATAAAAA:2,
000001:AAACAGAAAA:2, 000001:GCAAAAAAAA:2, 000001:AAAAACAAGA:2,
000001:AGAATAAAAA:2, 000001:ATAAAAAAGA:2, 000001:AAATAAACAA:2,
000001:AAAAAAAACT:2, 000001:AAAAATAGAA:2, 000001:AAGAAACAAA:2,
000001:AAAAAACACA:2, 000001:AAAATAAAAT:2, 000001:CAAAAAAGAA:2,
000001:AAAATGAAAA:2, 000001:AGAAAAATAA:2, 000001:AAAGATAAAA:2,
000001:AAAAAATAAC:2, 000001:AAAACAAAGA:2, 000001:TCAAAAAAAA:2,
000001:AATAGAAAAA:2, 000001:AAACAAAAAG:2, 000001:AAAACAAAAT:2,
000001:AGAAAAAACA:2, 000001:ATAAAATAAA:2, 000001:ATAAAAAGAA:2,
000001:AACAAAAAAG:2, 000001:AAAAAGAACA:2, 000001:AAAAGCAAAA:2,
000001:AAAAAAGAGA:2, 000001:AAAAAAATCA:2, 000001:ATAGAAAAAA:2,
000001:AAAAAACTAA:2, 000001:AAAACAAATA:2, 000001:ACGAAAAAAA:2,
000001:AAGATAAAAA:2, 000001:AAAAAGACAA:2, 000001:AAAACTAAAA:2,
000001:AAGAAAAAAG:2, 000001:AATAAAAAAG:2, 000001:AAAAAAGGAA:2,
000001:ACACAAAAAA:2, 000001:AAAATAAATA:2, 000001:AAAATAAAGA:2,
000001:AGATAAAAAA:2, 000001:GAACAAAAAA:2, 000001:CAAAAAAAAG:2,
000001:ATAATAAAAA:2, 000001:AACAAACAAA:2, 000001:AAAAAACATA:2,
000001:TGAAAAAAAA:2, 000001:GAAAAGAAAA:2, 000001:AAAATCAAAA:2,
000001:AGAAAAAAAC:2, 000001:TAAACAAAAA:2, 000001:AACAAAAGAA:2,
000001:AAAAAGGAAA:2, 000001:AACACAAAAA:2, 000001:AAAAAATACA:2,
000001:AAAAATAAAC:2, 000001:AAATAAAAAC:2, 000001:AAAAAAGTAA:2,
000001:AATAAAAAAT:2, 000001:AAAACAATAA:2, 000001:AAAAAAGCAA:2,
000001:AGAAATAAAA:2, 000001:GAAAAAAAAG:2, 000001:AATACAAAAA:2,
000001:AATCAAAAAA:2, 000001:ACCAAAAAAA:2, 000001:CAAAAAGAAA:2,
000001:AAGAAAATAA:2, 000001:AATAAAATAA:2, 000001:ATAACAAAAA:2,
000001:AAAACGAAAA:2, 000001:GAAAAAGAAA:2, 000001:AAATAACAAA:2,
000001:ACAAAAAAAT:2, 000001:AAAAATATAA:2, 000001:AAATAAGAAA:2,
000001:CCAAAAAAAA:2, 000001:AACAAAAAAT:2, 000001:ATAAATAAAA:2,
000001:CAAGAAAAAA:2, 000001:AAACAAAATA:2, 000001:AAAAAAAACC:2,
000001:AAAAAGAAGA:2, 000001:AAAACAAAAG:2, 000001:ATAAAAAAAG:2,
000001:AAATAAATAA:2, 000001:TAATAAAAAA:2, 000001:CAAAATAAAA:2,
000001:AAAAAACCAA:2, 000001:TAAATAAAAA:2, 000001:AGAAAGAAAA:2,
000001:AAAGAAAAAT:2, 000001:AAAAAAACAC:2, 000001:AAAAAGATAA:2,
000001:AAGAAAAAAC:2, 000001:CAAACAAAAA:2, 000001:GAAAAAAACA:2,
000001:AAACAAATAA:2, 000001:AAGAAAAATA:2, 000001:AGAAAAAAAG:2,
000001:AAAAGACAAA:2, 000001:AAAAAGAAAG:2, 000001:AAAAAATTAA:2,
000001:AAAAAAAAGC:2, 000001:AAATATAAAA:2, 000001:AACAAAAAAC:2,
000001:AAAAAAATTA:2, 000001:AATAAACAAA:2, 000001:AAAGAGAAAA:2,
000001:AAAAAATATA:2, 000001:ACAAAAGAAA:2, 000001:AAGAAAAGAA:2,
000001:TAAAAAAGAA:2, 000001:GATAAAAAAA:2, 000001:AAAAGATAAA:2,
000001:ATTAAAAAAA:2, 000001:AAAAATGAAA:2, 000001:CAAAAAAAAT:2,
000001:AAGAGAAAAA:2, 000001:AAAATAAAAG:2, 000001:AAAAGAATAA:2,
000001:AAAAGAACAA:2, 000001:AACAAAAAGA:2, 000001:AACTAAAAAA:2,
000001:ACAAATAAAA:2, 000001:TTAAAAAAAA:2, 000001:AAAAACTAAA:2,
000001:AAGAAAAACA:2, 000001:AAGCAAAAAA:2, 000001:TACAAAAAAA:2,
000001:AAAAAAAAAA:0, 000001:TAAAAAAACA:2, 000001:AAAAGAAGAA:2,
000001:AAAATATAAA:2, 000001:ATAAAAACAA:2, 000001:ACAAAATAAA:2,
000001:AAAACAACAA:2, 000001:CAAAAAACAA:2, 000001:CACAAAAAAA:2,
000001:AAACAATAAA:2, 000001:AAAACAAACA:2
%#% 11:37:56 ( 0.0000 : 0.0000) Processed 1 sequences Average length: 11 Total fuzzy comparisons: 812
%#% 11:37:56 ( 0.0000 : 0.0000) Finish
Total Elapsed Time: 0 secs
**** WordSize: 10 StringSize: 1000 WordCount: 1 StringCount: 1000 Xor: 0 Trie: 5.86920619010925 (0.03125 + 5.83795619010925)
**** WordSize: 10 StringSize: 1000 WordCount: 1 StringCount: 1000 Xor: 0 Trie: 5.86920619010925 (0.03125 + 5.83795619010925)
%#% 11:37:57 ### xor_fuzz search done.
%#% 11:37:57 ( 0.0156 : 0.0156) Finish
Total Elapsed Time: 0.015625 secs
[11:37:57.14] P:\test\demerphq>