# c:\perl\sam\fasta34.exe FASTA searches a protein or DNA sequence data bank version 3.4t21 May 14, 2003 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hahu.aa, 141 aa vs mu.lib library 1776 residues in 7 sequences Altschul/Gish params: n0: 141 Lambda: 0.158 K: 0.019 H: 0.100 FASTA (3.45an0 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7) GTM1_MOUSE GLUTATHIONE S-TRANSFERASE GT8.7 (EC 2. ( 217) 51 18.7 0.48 GTM1_RAT GLUTATHIONE S-TRANSFERASE YB1 (EC 2.5.1. ( 217) 42 16.7 1.8 GTMU_CRILO GLUTATHIONE S-TRANSFERASE Y1 (EC 2.5.1 ( 217) 41 16.4 2 GTMU_RABIT GLUTATHIONE S-TRANSFERASE MU 1 (EC 2.5 ( 217) 37 15.5 3.4 GTM1_HUMAN GLUTATHIONE S-TRANSFERASE MU 1 (EC 2.5 ( 217) 35 15.1 4.1 GLNA_ANASP GLUTAMINE SYNTHETASE (EC 6.3.1.2) (GLU ( 473) 35 15.0 6.1 GTM4_HUMAN GLUTATHIONE S-TRANSFERASE MU 4 (EC 2.5 ( 218) 28 13.5 6.5 >>GTM1_MOUSE GLUTATHIONE S-TRANSFERASE GT8.7 (EC 2.5.1.1 (217 aa) initn: 40 init1: 40 opt: 51 Z-score: 66.1 bits: 18.7 E(): 0.48 Smith-Waterman score: 51; 25.641% identity (27.027% ungapped) in 39 aa overlap (35-72:176-213) 10 20 30 40 50 60 HAHU ADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFD-LSHGSAQVKGHGKKVA .::. . .. .:. :.. :: .:. .. .: GTM1_M WFAGDKVTYVDFLAYDILDQYRMFEPKCLDAFPNLRDFLARFEGLKKISAYMKS-SRYIA 150 160 170 180 190 200 70 80 90 100 110 120 HAHU DALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHA . . .:: GTM1_M TPIFSKMAHWSNK 210 >>GTM1_RAT GLUTATHIONE S-TRANSFERASE YB1 (EC 2.5.1.18) ( (217 aa) initn: 36 init1: 36 opt: 42 Z-score: 55.0 bits: 16.7 E(): 1.8 Smith-Waterman score: 42; 34.783% identity (36.364% ungapped) in 23 aa overlap (35-56:176-198) 10 20 30 40 50 60 HAHU ADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFD-LSHGSAQVKGHGKKVA .::. : .. .:. :.. :: .:. GTM1_R WFAGDKVTYVDFLAYDILDQYHIFEPKCLDAFPNLKDFLARFEGLKKISAYMKSSRYLST 150 160 170 180 190 200 70 80 90 100 110 120 HAHU DALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHA GTM1_R PIFSKLAQWSNK 210 >>GTMU_CRILO GLUTATHIONE S-TRANSFERASE Y1 (EC 2.5.1.18) (217 aa) initn: 36 init1: 36 opt: 41 Z-score: 53.8 bits: 16.4 E(): 2 Smith-Waterman score: 41; 36.364% identity (38.095% ungapped) in 22 aa overlap (36-56:177-198) 10 20 30 40 50 60 HAHU DKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFD-LSHGSAQVKGHGKKVAD ::. : .. .:. :.. :: .: GTMU_C FAGDKVTLCGFLAYDVLDQYQMFEPKCLDPFPNLKDFLARFEGLKKISAYMKTSRFLRRP 150 160 170 180 190 200 70 80 90 100 110 120 HAHU ALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHAS GTMU_C IFSKMAQWSNK 210 >>GTMU_RABIT GLUTATHIONE S-TRANSFERASE MU 1 (EC 2.5.1.18 (217 aa) initn: 32 init1: 32 opt: 37 Z-score: 48.8 bits: 15.5 E(): 3.4 Smith-Waterman score: 44; 29.508% identity (33.962% ungapped) in 61 aa overlap (31-91:17-69) 10 20 30 40 50 60 HAHU VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGK ::.: . : : . . . :.: ..: GTMU_R PMTLGYWDVRGLALPIRMLLEY--TDTSYEEKKYTMGDAPNYDQSK 10 20 30 40 70 80 90 100 110 120 HAHU KVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPA ... .: .. :.:: : : : .::: GTMU_R WLSEKFTLGL----DFPN-LPYLID-GTHKLTQSNAILRYLARKHGLCGETEEERIRVDI 50 60 70 80 90 130 140 HAHU VHASLDKFLASVSTVLTSKYR GTMU_R LENQLMDNRFQLVNVCYSPDFEKLKPEYLKGLPEKLQLYSQFLGSLPWFAGDKITFADFL 100 110 120 130 140 150 >>GTM1_HUMAN GLUTATHIONE S-TRANSFERASE MU 1 (EC 2.5.1.18 (217 aa) initn: 28 init1: 28 opt: 35 Z-score: 46.4 bits: 15.1 E(): 4.1 Smith-Waterman score: 41; 30.769% identity (36.364% ungapped) in 39 aa overlap (24-56:160-198) 10 20 30 40 HAHU VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFL-----SFPTTKTYFPHFD- : . :.:.: .::. : .. .:. GTM1_H LPEKLKLYSEFLGKRPWFAGNKITFVDFLVYDVLDLHRIFEPKCLDAFPNLKDFISRFEG 130 140 150 160 170 180 50 60 70 80 90 100 HAHU LSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLV : . :: .:. GTM1_H LEKISAYMKSSRFLPRPVFSKMAVWGNK 190 200 210 >>GLNA_ANASP GLUTAMINE SYNTHETASE (EC 6.3.1.2) (GLUTAMAT (473 aa) initn: 31 init1: 31 opt: 35 Z-score: 39.7 bits: 15.0 E(): 6.1 Smith-Waterman score: 38; 30.435% identity (31.818% ungapped) in 23 aa overlap (96-118:447-468) 70 80 90 100 110 120 HAHU LTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASL ...:: .. . : : : ::. GLNA_A SLELALEALENDHAFLTDTGVFTEDFIQNWIDYKLANEVKQMQLRPH-PYEFSIYYDV 420 430 440 450 460 470 130 140 HAHU DKFLASVSTVLTSKYR >>GTM4_HUMAN GLUTATHIONE S-TRANSFERASE MU 4 (EC 2.5.1.18 (218 aa) initn: 28 init1: 28 opt: 28 Z-score: 37.7 bits: 13.5 E(): 6.5 Smith-Waterman score: 41; 30.769% identity (36.364% ungapped) in 39 aa overlap (24-56:161-199) 10 20 30 40 HAHU VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFL-----SFPTTKTYFPHFD- : . :.:.: .::. : .. .:. GTM4_H LPTMMQHFSQFLGKRPWFVGDKITFVDFLAYDVLDLHRIFEPNCLDAFPNLKDFISRFEG 140 150 160 170 180 190 50 60 70 80 90 100 HAHU LSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLV : . :: .:. GTM4_H LEKISAYMKSSRFLPKPLYTRVAVWGNK 200 210 141 residues in 1 query sequences 1776 residues in 7 library sequences Scomplib [34t21] start: Tue Jan 18 16:24:00 2005 done: Tue Jan 18 16:24:33 2005 Scan time: 0.000 Display time: 14.000 Function used was FASTA [version 3.4t21 May 14, 2003]