>string1 AAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTTTTTTTTTTTTTTTT >string2 AAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTT #### P:\test>484593-4 duptest.dat 000:001 L[017] (0 0)'AAAAAAAAAAAAAAAAA' (47 47)'TTTTTTTTTTTTTTTTT' 1 trial of duptest.dat ( 1.210ms total), 1.210ms/trial #### P:\test>gf -MIN=16 duptest.gf Completed in 0.000209 Best match: >string1 - >string2. 17 characters starting at 0 and 0. 123456789 123456789 123456789 123456789 123456789 123456789 123456789 AAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTTTTTTTTTTTTTTTT AAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTT AAAAAAAAAAAAAAAAA #### P:\test>type duptest.gf >string1 TTTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAA >string2 AAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTT P:\test>gf -MIN=16 duptest.gf Completed in 0.00021 Best match: >string1 - >string2. 17 characters starting at 0 and 47. 123456789 123456789 123456789 123456789 123456789 123456789 123456789 TTTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAA TTTTTTTTTTTTTTTTT AAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTT ...............................................TTTTTTTTTTTTTTTTT P:\test>type duptest.gf >string1 AAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTT >string2 TTTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAA P:\test>gf -MIN=16 duptest.gf Completed in 0.000209 Best match: >string1 - >string2. 17 characters starting at 0 and 47. 123456789 123456789 123456789 123456789 123456789 123456789 123456789 AAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTT AAAAAAAAAAAAAAAAA TTTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAA ...............................................AAAAAAAAAAAAAAAAA #### P:\test>gf -MIN=16 duptest.gf Completed in 0.000207 Best match: >string1 - >string2. 17 characters starting at 0 and 0. 123456789 123456789 123456789 123456789 123456789 123456789 123456789 AAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTTTTTTTTTTTTTTTTT AAAAAAAAAAAAAAAAC AAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTTT AAAAAAAAAAAAAAAAG P:\test>gf -MIN=8 duptest.gf Completed in 0.000296 Best match: >string1 - >string2. 17 characters starting at 0 and 0. 123456789 123456789 123456789 123456789 123456789 123456789 123456789 AAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTTTTTTTTTTTTTTTTT AAAAAAAAAAAAAAAAC AAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTTT AAAAAAAAAAAAAAAAG P:\test>gf -MIN=4 duptest.gf Completed in 0.000611 Best match: >string1 - >string2. 17 characters starting at 0 and 0. 123456789 123456789 123456789 123456789 123456789 123456789 123456789 AAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTTTTTTTTTTTTTTTTT AAAAAAAAAAAAAAAAC AAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTTT AAAAAAAAAAAAAAAAG P:\test>gf -MIN=2 duptest.gf Completed in 0.000909 Best match: >string1 - >string2. 19 characters starting at 44 and 44. 123456789 123456789 123456789 123456789 123456789 123456789 123456789 AAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTTTTTTTTTTTTTTTTT ............................................CCTTTTTTTTTTTTTTTTT AAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTTT ............................................GGTTTTTTTTTTTTTTTTT