sub getSeqfromfasta2lmers { my $file = shift; my @seqs= (); open INFILE, "<$file" or die "$0: Can't open file $file: $!"; my $in = Bio::SeqIO->new(-format => 'fasta', -noclose => 1 , -fh => \*INFILE); while ( my $seq = $in->next_seq() ) { push @seqs, $seq->seq(); } #end while return @seqs; }