# .bash_profile

# Get the aliases and functions 
if [ -f ~/.bashrc ]; then
    . ~/.bashrc          
fi

# My path to the C library program
export CFLAGS="-I $HOME/MyBioTool/libstree-0.4.2/include"
export LDFLAGS="-L $HOME/MyBioTool/libstree-0.4.2/lib"

PATH=$PATH:$HOME/bin:    

export PATH              
unset USERNAME           
export PERL5LIB=/home/monkfan/lib/perl5/site_perl/5.8.5/i686-linux:/home/monkfan/lib/perl5/site_perl/5.8.5


##</code><code>##

Running make test
  Can't test without successful make
Running make install
  make had returned bad status, install seems impossible


##</code><code>##

~/.cpan/build/Tree-Suffix-0.12$ perl Makefile.pl CFLAGS="$CFLAGS -I$HOME/MyBioTool/libstree-0.4.2/include" LDFLAGS="$LDFLAGS -L$HOME/MyBioTool/libstree-0.4.2/lib" 

##</code><code>##

 export LD_LIBRARY_PATH=/home/monkfan/MyBioTool/libstree-0.4.2/lib:${LD_LIBRARY_PATH}
    export CFLAGS="-I $HOME/MyBioTool/libstree-0.4.2/include";
    export LDFLAGS="-L $HOME/MyBioTool/libstree-0.4.2/lib";


##</code><code>##

    export LIBRARY_PATH=$HOME/MyBioTool/libstree-0.4.2/lib
   
##</code><code>##

__BEGIN__
use strict;
use ExtUtils::MakeMaker;

WriteMakefile(
  NAME          => 'Tree::Suffix',
  VERSION_FROM  => 'lib/Tree/Suffix.pm',
  ABSTRACT_FROM => 'lib/Tree/Suffix.pm',
  AUTHOR        => 'gray <gray@cpan.org>',
  PREREQ_PM     => { 'Test::More' => 0 },
  LIBS          => [ '-L/home/monkfan/MyBioTool/libstree-0.4.2/lib -lstree' ],
  INC           =>  '-I/home/monkfan/MyBioTool/libstree-0.4.2/include' ,
  clean         => { FILES => 'Tree-Suffix-*' },
  dist          => { COMPRESS => 'gzip -9f', SUFFIX => 'gz', },
);


__END__

##</code><code>##

$ perl Makefile.PL PREFIX=~/lib/   LIB=~/lib/
  OR
$ perl Makefile.PL PREFIX=~/lib/perl5/site_perl/5.8.5 LIB=~/lib/perl5/site_perl/5.8.5