local This is the Blast sequence alignment workflow. ##

##


     uplfile
         
     
     



##

##

package Upload_file;

use strict;
use Fcntl;

use base qw( Workflow::Action );
use Workflow::Exception qw( workflow_error );

sub new {
   my $class = shift;
   my $self  = {};
   bless ($self, $class);
   return $self;
}

sub execute {
   my ( $self, $wf ) = @_;

    my $ifile = "/mypath/to/codelib/perl/lib/myapp/testseq.txt";

    sysopen(IFILE, $ifile, O_RDONLY)
       or die "Can't open $ifile : $!";

    my @file = ;

    close IFILE;

   print "testseq is ", @file, "\n";
  return 1;

}

1;


##

##


#! /bin/perl -w

use strict;
use Workflow::Factory qw( FACTORY );
use Fcntl;
use File::Basename;

Log::Log4perl::init('l4p.conf');


my $workflow_conf  = 'wf_test.xml';
my $action_conf    = 'action.xml';
my $pers           = 'persister.xml';

FACTORY->add_config_from_file(
     workflow   => $workflow_conf,
     action     => $action_conf,
     persister  => $pers,

);


my $wf = FACTORY->fetch_workflow('uplfile', "PITGKDNR");

print "Workflow 1 ", $wf->id, " ",
       "currently at state ", $wf->state, "\n";

print "Available actions: ", $wf->get_current_actions, "\n";

$wf->execute_action('upload file');


##

##

Workflow 1 PITGKDNR currently at state INITIAL
Available actions: upload file
Can't locate object method "new" via package "myapp::Upload_file" at /lib/x86_64/pkg/perl-5.8.8/lib/site_perl/5.8.8/Workflow/Factory.pm line 546.

##

##

Upload_file->new()->execute();