use strict; use warnings; while () { print unless (/COMMENT/ .. /FEATURES/); print if (/FEATURES/); } __DATA__ LOCUS 4 302276 bp DNA linear HTG 31-OCT-2008 DEFINITION Mus musculus chromosome 4 NCBIM37 partial sequence 138489260..138791535 reannotated via EnsEMBL ACCESSION chromosome:NCBIM37:4:138489260:138791535:-1 KEYWORDS . SOURCE house mouse. ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus. COMMENT This sequence was annotated by the Ensembl system. Please visit the Ensembl web site, http://www.ensembl.org/ for more information. All feature locations are relative to the first (5') base of the sequence in this file. The sequence presented is always the forward strand of the assembly. Features that lie outside of the sequence contained in this file have clonal location coordinates in the format: .:.. The /gene indicates a unique id for a gene, /note="transcript_id=..." a unique id for a transcript, /protein_id a unique id for a peptide and note="exon_id=..." a unique id for an exon. These ids are maintained wherever possible between versions. All the exons and transcripts in Ensembl are confirmed by similarity to either protein or cDNA sequences. Features not parsed: gene AL807811.9.1.249021:69347..168228 /locus_tag="Capzb" /gene="ENSMUSG00000028745" /note="capping protein (actin filament) muscle Z-line, beta [Source:MGI;Acc:MGI:104652]" mRNA join(complement(42593..42690), AL807811.9.1.249021:115325..115414, AL807811.9.1.249021:133677..133798, AL807811.9.1.249021:138400..138513, AL807811.9.1.249021:156412..156553, AL807811.9.1.249021:156884..157000, AL807811.9.1.249021:163445..163510, AL807811.9.1.249021:164172..164248, AL807811.9.1.249021:167419..168228) /gene="ENSMUSG00000028745" /note="transcript_id=ENSMUST00000102508" CDS join(complement(42593..42595), AL807811.9.1.249021:115325..115414, AL807811.9.1.249021:133677..133798, AL807811.9.1.249021:138400..138513, AL807811.9.1.249021:156412..156553, AL807811.9.1.249021:156884..157000, AL807811.9.1.249021:163445..163510, AL807811.9.1.249021:164172..164248, AL807811.9.1.249021:167419..167506) /db_xref="CCDS:CCDS18841.1" /db_xref="MGI:Capzb" /db_xref="Vega_mouse_transcript:OTTMUST00000022955" /protein_id="ENSMUSP00000099566" /gene="ENSMUSG00000028745" /note="transcript_id=ENSMUST00000102508" FEATURES Location/Qualifiers source 1..302276 /db_xref="taxon:10090" /organism="Mus musculus" gene complement(267261..268504) /note="locus_tag=Rnf186" /gene="ENSMUSG00000070661" /note="ring finger protein 186 [Source:MGI;Acc:MGI:1914075]