use strict;
use warnings;
####
use strict;
use warnings;
use Bio::SeqIO::qual;
my $file = "Qual.txt";
my $qual_obj = Bio::SeqIO::qual->new(-file =>"<$file",-format=>'qual',);
my %qual_hash ;
while(my $qual = $qual_obj->_next_qual){
$qual_hash{$qual->id}= $qual->qual();
}
use Data::Dumper;
print Dumper(\%qual_hash);
##
##
use strict;
use warnings;
use Bio::SeqIO;
my $file = "Qual.txt";
my $qual_obj = Bio::SeqIO->new(-file =>"<$file",-format=>'qual',);
##
##
#THIS DOESN'T READ THE FILE RIGHT..
my $file = "Qual.txt";
my $qual_obj = Bio::SeqIO->new(-file =>"<$file",-format=>'fasta',);
my %seq_hash = ();
while(my $seq= $qual_obj->next_seq){
$seq_hash{$seq->id} = $seq->seq;
}
use Data::Dumper;
print Dumper(\%seq_hash);
##
##