use strict;

my $ish = $ARGV[0];

open (ISH, "<", $ish) || die "$!";
open (OUT, ">", "out.txt") || die "$!";
{
$/ = "//";

while (<ISH>){

	m/DEV_STAGE\t(.*?)\n/g;
	my $a= $1;
	my $b;
	if (m/PREDICTED_GENE\t(.*?)\n/g){
	
	$b= $1;
}
	else{
		$b = '#';
	}
	
	while (m/\tSTAINED_REGION:\t(.*?)\tSTAINED_MOL:\t(.*?)\n/g) {
	
	my $c = $1;
	my $x = $2;
	print OUT "$b\t$a\t$c\t$x\n";

}
}	
}