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#!/usr/bin/env perl

...
    say "\tBasic:   $header_data{$_}{b}";
    say "\tNeutral: $header_data{$_}{n}";
}

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$ pm_fasta_amino_charge_calc.pl pm_mtmccs_data_modified.fasta
Header: DROTME_HH_Q02936 
...
        Acidic:  18
        Basic:   17
        Neutral: 69