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 LOCUS       PPI3_SYNY3               379 aa            linear   BCT 1
+3-NOV-2019
DEFINITION  RecName: Full=Putative thylakoid lumen peptidyl-prolyl cis
+-trans
            isomerase sll0408; Short=Putative thylakoid lumen PPIase; 
+AltName:
...
  REMARK    NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].;
            STRAIN=PCC 6803 / Kazusa
REFERENCE   2  (residues 1 to 379)

 
open(GENBANK, "/Users/ale/Desktop/seq.gp.txt") or die; 

...

my $aminoAcids = uc($1);
print(FH "$locus\n$acids\n$aminoAcids\n");