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my_script.pl --option1 --option2 --job some_job.pl -option1 --option2 
+--option3

my $job_flag = 0;
foreach my $i (0..$#ARGV) {
...
   ​$job_flag = 1 if($ARGV[$i] =~ /^(\-\-|\-)job$/);
   ​undef $ARGV[$i] if($job_flag);
}

my_script.pl --option1 --option2 --job some_job.pl -option1 'some_job2
+.pl -x abc' -option2

$VAR1 = [                                                             
+                                                                     
+       
          '--option1',
...
          'some_job2.pl -x abc',
          '-option2'
        ];

$VAR1 = [                                                             
+                                                                     
+       
          '--option1',
...
          '\'some_job2.pl -x abc\'',
          '-option2'
        ];