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my $sample_cds_genotype = $prefixe ."_cds_genotype";
my $sample_cds_RT = $prefixe ."_cds_RT";
...
    print "Finished\n";
}

 
[foulquie@node6 test]$ perl test_fontion4.pl BC list_geno_palm_51_list
+e_genotype test 30 1
Use of my $_ is experimental at test_fontion4.pl line 44.
...
genotype13
Can't use string ("BC13_IV_.RG") as a HASH ref while "strict refs" in 
+use at test_fontion4.pl line 92, <RESULTAT> line 2.