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#!/usr/bin/env perl

...
SSSSSSSSSSSSSSSSSSSSSSSS..............................................
+...........................................
.............
..........................................

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> gi|11SB_CUCMA Train|1 21
MARSSLFTFLCLAVFINGCLSQIEQQSPWEFQGSEVWQQHRYQSPRACRLENLRAQDPVRLLLPGFSNAP
+KLIFVAQGFGIRGIAIPGCAETYQTSSSSSSSSSSSSSSSSSSSSS.......................
+...................................................
> gi|1A43_HUMAN Train|1 24
MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRME
+PRAPWIEQEGPEYWSQTDRANLGTLRGYYNQSEDGSHTIQRMYGCDVGPDGRFLRGYQQDAYDGKDYIA
+LNEDLRSWTAADMAAQITQRKWETAHEAESSSSSSSSSSSSSSSSSSSSSSSS................
+.....................................................................
+...........................................................

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#!/usr/bin/env perl

...
        say $seq;
    }
}

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#!/usr/bin/env perl

...
        print "$seq\n";
    }
}