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ID   ARF1_PLAFA              Reviewed;         181 AA.
...
 ISFTVWDVGG QDKIRPLWRH YYSNTDGLIF VVDSNDRERI DDAREELHRM INEEELKDAI
 ILVFANKQDL PNAMSAAEVT EKLHLNTIRE RNWFIQSTCA TRGDGLYEGF DWLTTHLNNA
K

 
>NM_012514 | Rattus norvegicus | breast cancer 1 (Brca1) | mRNA
 CGCTGGTGCAACTCGAAGACCTATCTCCTTCCCGGGGGGGCTTCTCCGGCATTTAGGCCT
...
 TTGGAGTGTCCAATCTGTTTGGAACTGATCAAAGAACCGGTTTCCACACAGTGCGACCAC
 ATATTTTGCAAATTTTGTATGCTGAAACTCCTTAACCAGAAGAAAGGACCTTCCCAGTGT
 CCTTTGTGTAAGAATGAGATAACCAAAAGGAGCCTACAAGGAAGTGCAAGG

 
#!/usr/bin/perl
use warnings;
...
 if ($lines =~ /^AC\s+(.*)\;|^OS\s+(.*)|^OX\s+(.*)|^ID\s+(.*)|^GN\s+(.
+*)/)
    print  $1, $2, $3, $4, $5, "\n"; 
 }

Use of uninitialized value $1 in print at ./file.pl line 11, <UNIPROT>
+ line 1.
...
Use of uninitialized value $4 in print at ./file.pl line 11, <UNIPROT>
+ line 11.
Use of uninitialized value $5 in print at ./file.pl line 11, <UNIPROT>
+ line 11.
NCBI_TaxID=9606;