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  1. or download this
    #!usr/bin/perl
use strict;
...

$ perl bio.pl sequence.fa
23
  2. or download this
    $ cat sequence.fa | grep -bo ATG
16:ATG
...
1272:ATG
tinyos@tinyOMN:~/Monks$ cat sequence.fa | grep -bo ATG | wc -l
24
  3. or download this
    #!usr/bin/perl
use say;
...

# print Dumper \@AoH;
# print Dumper \%HoH;