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Gene: blahblah
Query: FDVKHGAHJKHBHXYJTJGHCJHZGJHJJFVJKFG

    Query= 8
         (545 letters)
...
           K+ F         FLL GT+LSAC+ +++            DL++L+KET  +DIDLSK
Sbjct: 3   KKKFLSRFSFSSLFLLCGTLLSACTGIQA------------DLRNLIKETTGKDIDLSK
+A 50

#! /usr/local/bin/perl -w
...
return %alignment_hash;
}