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my @array = (undef) x $size[0];
$_ = [ map { [(0) x $size[2]] } (undef) x $size[1] ] for @array;

$array[$foo][$bar][$baz] = $quux
    if $foo >= -$size[0] and $foo < $size[0]
        and $bar >= -$size[1] and $bar < $size[1]
        and $baz >= -$size[2] and $baz < $size[2];