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  1. or download this
    use Bio::FASTASequence::File;
my $file = '/path/to/seq.fa';
...
  print $counter,": ",$result_ref->{$_}->getSequence(),"\n";
  $counter++;
}
  2. or download this
    >Seq1 (two lines)
AAAAAAAAAAAAA
CCAAAAAAAAAAA
...
AAAAAAAAAAAAA
>Seq3 (one line)
TTTTTTTTTTTTAACTGAAGATTCGC