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>gi|77641047|gb|ABB00395.1| I2 [Lycopersicon esculentum]
TRTPSTSLVVDSGIFGRQNEIEDLVGRLLSMDTKGKNLAVVPIVGMGGLGKTTLAKAVYNDERVKKHFGL
...
TRTPSTSLVVDSGIFGRQNEIEDLVGRLLSMDTKGKNLAVVPIVGMGGLGKTTLAKAVYNDERVKKHFGL
TAWFCVSEAYDAFRITKGILQEIGSTDLKADHNLNQLQVKVKESLKGKKFLIVLDDVWNDNYNEWDDLRN
(many more lines repeated like this)

    $seqs =~ /^(\>.*(?=\>))/ms;