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  1. or download this
    
my $s1 = "1,0,CTGCCACCGCTGT";
...
#The format show this: sequence_index,string_pos,$string
#So the two strings above are in the same sequence 1.
  2. or download this
    CTGCCACCGCTGT                (s1)
     ACCGCTGTGTTTCGGCCGGCGA  (s2)
...
                             
and also to identify the position of the interesected string,
in this case 6