Re^6: System call doesn't recognise '>'

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my @array = ($command, $arg1, $arg2, $arg3);
system (@array);

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Clover: Cis-eLement OVERrepresentation
Compiled on Jul 18 2006

...
Lowercase filtering     OFF
Pseudocount:            0.375
Random seed:            1

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my @array = ($command, "$arg1 $arg2 $arg3");
system (@array);

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Clover: Cis-eLement OVERrepresentation
Compiled on Jul 18 2006

Error: motif and sequence files required

Usage summary: clover [options] mymotifs myseqs.fa [BGfiles]

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