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       # Now we can run lucy several times, one for each library
        my $lib;my $in_s; my $in_q; my $vec; my $spli; my $out_s; my $
+out_q;
...
                }
        }

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assignment
library: gammarus
vector file: /home/sbi6dap/est2uni/data/vector.fasta
vector splice site file: /home/sbi6dap/est2uni/data/splice.fasta