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input file:
11880    13417    -    S00010GM001    sml_056    sp|YV02233      desc
...
12522    12576    +    S00013GM001    sml_027    sp|0235777      desc
13247    13349    -    S00013GM002    sml_088    sp|YV02375      desc

sample output files:

...

files 11 and 12 = same as above (like output 10, because there are hit
+s found with S00011 and S00012).

#!/usr/bin/perl
use strict;
...
$pattern=();$search=();
}