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#!/usr/bin/perl
use strict;
use warnings;
...
                   A 169    TYR       A  41    TYR~?     
                   A 172    HIS       A  95    HIS^?     
                   A 267    XYZ       A  98    XYZ~?

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F:\_wo\pl_test>perl 864768.pl

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F:\_wo\pl_test>