in reply to Re: buffering issue?
in thread buffering issue?

Hey moritz. Thanks for the reply. Yes I have checked that all the data is in the input file, which is encoded in UTF-8. Input buffer flushing eliminated. Is there a way to flush the output buffer before start parsing the files? Thanks in advance for any other suggestions yo may have. What I see is this line:

845667 homosapiens ENSG00000104904|ENST0000059094

instead of:

845667 homosapiens ENSG00000104904|ENST00000590943 92 98 7mer-m8 ? 0.017184 1<\p>

Replies are listed 'Best First'.
Re^3: buffering issue?
by choroba (Cardinal) on Apr 02, 2013 at 09:34 UTC
    If the file you are reading was created by the same program, make sure you closed the file before trying to read it.
    لսႽ† ᥲᥒ⚪⟊Ⴙᘓᖇ Ꮅᘓᖇ⎱ Ⴙᥲ𝇋ƙᘓᖇ
[reply]

In Section Seekers of Perl Wisdom