in reply to find reverse complement of every 2nd line
I love Perlmonks but Google is good for searching too, for example a search for "perl bioinformatics cpan reverse complement" yielded this page, which appears to "calculate the reverse complement of a strand of DNA" ... whatever that is. :)
jeffa
L-LL-L--L-LL-L--L-LL-L-- -R--R-RR-R--R-RR-R--R-RR B--B--B--B--B--B--B--B-- H---H---H---H---H---H--- (the triplet paradiddle with high-hat)
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