Module GO::Parser install fail?

Noben has asked for the wisdom of the Perl Monks concerning the following question:

Hello! I'm installing a perl module GO::Parser as a prereq and can't seem to get it to work. Using cpan shell - install GO::Parser i get this during the install:

t/t270oborel_in_owl.t .... Dubious, test returned 5 (wstat 1280, 0x500
+)
Failed 4/4 subtests 
t/t290disjoint.t ......... ok   

Test Summary Report
-------------------
t/t270oborel_in_owl.t  (Wstat: 1280 Tests: 0 Failed: 0)
  Non-zero exit status: 5
  Parse errors: Bad plan.  You planned 4 tests but ran 0.
Files=24, Tests=136, 12 wallclock secs ( 0.12 usr  0.93 sys +  3.24 cu
+sr  6.27 csys = 10.56 CPU)
Result: FAIL
Failed 1/24 test programs. 0/136 subtests failed.
make: *** [test_dynamic] Error 255
[download]

I followed the instructions(protocols 1&2) from http://cpansearch.perl.org/src/CMUNGALL/go-perl-0.15/INSTALL.html as well. Not sure where to go from here. I'm on a Ubuntu server & have sudo. Perl (v5.18.2) Thanks!

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Re: Module GO::Parser install fail? by blindluke (Hermit) on Nov 20, 2014 at 06:11 UTC
Welcome to the Monastery, Noben. It seems it's a bug with the recent release. See the bug report. There is a patch in the report submitted by osallou, I'll quote it here for convenience: --- a/GO/xsl/oboxml_to_owl.xsl +++ b/GO/xsl/oboxml_to_owl.xsl @@ -815,7 +815,7 @@ </xsl:variable> <xsl:element name="{$property}"> <xsl:if test="contains(type,':')"> - <xsl:attribute name="xmlns"> + <xsl:attribute name="goxmlns"> <xsl:variable name="ns"> <xsl:value-of select="substring-before(type,':')"/> </xsl:variable> @@ -860,7 +860,7 @@ </xsl:variable> <xsl:element name="{$property}"> <xsl:if test="contains(type,':')"> - <xsl:attribute name="xmlns"> + <xsl:attribute name="goxmlns"> <xsl:variable name="ns"> <xsl:value-of select="substring-before(type,':')"/> </xsl:variable> [download] In cases like this, it's always good to start with the module documentation and look at the issues. - Luke	[reply] [d/l]

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Re: Module GO::Parser install fail?
by blindluke (Hermit) on Nov 20, 2014 at 06:11 UTC

Welcome to the Monastery, Noben.

It seems it's a bug with the recent release. See the bug report.

There is a patch in the report submitted by osallou, I'll quote it here for convenience:

 
--- a/GO/xsl/oboxml_to_owl.xsl
+++ b/GO/xsl/oboxml_to_owl.xsl
@@ -815,7 +815,7 @@
     </xsl:variable>
     <xsl:element name="{$property}">
       <xsl:if test="contains(type,':')">
-        <xsl:attribute name="xmlns">
+        <xsl:attribute name="goxmlns">
           <xsl:variable name="ns">
             <xsl:value-of select="substring-before(type,':')"/>
           </xsl:variable>
@@ -860,7 +860,7 @@
     </xsl:variable>
     <xsl:element name="{$property}">
       <xsl:if test="contains(type,':')">
-        <xsl:attribute name="xmlns">
+        <xsl:attribute name="goxmlns">
           <xsl:variable name="ns">
             <xsl:value-of select="substring-before(type,':')"/>
           </xsl:variable>
[download]

In cases like this, it's always good to start with the module documentation and look at the issues.

- Luke

[reply]
[d/l]