Re^4: Use of uninitialized value in subroutine entry at /home/roarce/perl5/perlbrew/perls/perl-5.28.0/lib/site_perl/5.28.0/Seeder/Finder.pm line 476, <IN> line 8192.

$finder->find_motifs;String found where operator expected at /home/roarce/perl5/perlbrew/perls/perl-5.28.0/lib/site_perl/5.28.0/Seeder/Finder.pm line 388, near "$ # {$ self -> {oligo_ref}}) { print "index: $ oligo_indice ("" (Missing operator before "index: $ oligo_indice ("?) Global symbol "$oligo_indice" requires explicit package name (did you forget to declare "my $oligo_indice"?) at /home/roarce/perl5/perlbrew/perls/perl-5.28.0/lib/site_perl/5.28.0/Seeder/Finder.pm line 387. syntax error at /home/roarce/perl5/perlbrew/perls/perl-5.28.0/lib/site_perl/5.28.0/Seeder/Finder.pm line 387, near "$ oligo_indice (" Global symbol "$print" requires explicit package name (did you forget to declare "my $print"?) at /home/roarce/perl5/perlbrew/perls/perl-5.28.0/lib/site_perl/5.28.0/Seeder/Finder.pm line 388. Global symbol "$count_indice" requires explicit package name (did you forget to declare "my $count_indice"?) at /home/roarce/perl5/perlbrew/perls/perl-5.28.0/lib/site_perl/5.28.0/Seeder/Finder.pm line 389. syntax error at /home/roarce/perl5/perlbrew/perls/perl-5.28.0/lib/site_perl/5.28.0/Seeder/Finder.pm line 389, near "$ count_indice (" Global symbol "$si" requires explicit package name (did you forget to declare "my $si"?) at /home/roarce/perl5/perlbrew/perls/perl-5.28.0/lib/site_perl/5.28.0/Seeder/Finder.pm line 390. Global symbol "$oligo_indice" requires explicit package name (did you forget to declare "my $oligo_indice"?) at /home/roarce/perl5/perlbrew/perls/perl-5.28.0/lib/site_perl/5.28.0/Seeder/Finder.pm line 390. Global symbol "$count_indice" requires explicit package name (did you forget to declare "my $count_indice"?) at /home/roarce/perl5/perlbrew/perls/perl-5.28.0/lib/site_perl/5.28.0/Seeder/Finder.pm line 390. Global symbol "@hd_matrix" requires explicit package name (did you forget to declare "my @hd_matrix"?) at /home/roarce/perl5/perlbrew/perls/perl-5.28.0/lib/site_perl/5.28.0/Seeder/Finder.pm line 391. Global symbol "$oligo_indice" requires explicit package name (did you forget to declare "my $oligo_indice"?) at /home/roarce/perl5/perlbrew/perls/perl-5.28.0/lib/site_perl/5.28.0/Seeder/Finder.pm line 391. Global symbol "$count_indice" requires explicit package name (did you forget to declare "my $count_indice"?) at /home/roarce/perl5/perlbrew/perls/perl-5.28.0/lib/site_perl/5.28.0/Seeder/Finder.pm line 391. syntax error at /home/roarce/perl5/perlbrew/perls/perl-5.28.0/lib/site_perl/5.28.0/Seeder/Finder.pm line 392, near "}" /home/roarce/perl5/perlbrew/perls/perl-5.28.0/lib/site_perl/5.28.0/Seeder/Finder.pm has too many errors. Compilation failed in require at - line 1. BEGIN failed--compilation aborted at - line 1.

Comment on Re^4: Use of uninitialized value in subroutine entry at /home/roarce/perl5/perlbrew/perls/perl-5.28.0/lib/site_perl/5.28.0/Seeder/Finder.pm line 476, <IN> line 8192.

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Re^5: Use of uninitialized value in subroutine entry at /home/roarce/perl5/perlbrew/perls/perl-5.28.0/lib/site_perl/5.28.0/Seeder/Finder.pm line 476, <IN> line 8192. by bliako (Abbot) on May 25, 2020 at 18:11 UTC
there seem to be extra spaces in the pasted string `$ # {$ self -> {oligo_ref}}` compared to the original `$#{ $self->{oligo_ref} }` If you click on the `[download]` link under debug code you will be able to copy-paste safely.	[reply] [d/l] [select]