Re^5: Get Fasta file with Protein Sequences given a file with Genbank Ids using Perl

Do you have a sub called write_sequence in your main package? No. So you can't call it!

Perhaps your object has a method of that name?

Edit: Find where you copy-pasted write_sequence from and refer to the docs for that module. You'll need to use the module in your program. I leave it to you to figure out which module it is. Hint: it's not ... LOL, just saw you figured it out. Nice!

The way forward always starts with a minimal test.

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Re^6: Get Fasta file with Protein Sequences given a file with Genbank Ids using Perl by dimitris852 (Acolyte) on Mar 21, 2016 at 05:38 UTC
All it needed was to add `use Bio:perl;` and now works! thanks!!	[reply] [d/l]