in reply to Re: create a binary matrix
in thread create a binary matrix

there are set of reads in the files but that has nothing to do with the output because with those I have created p.txt. The output I want is like:
gene NC_002755.fq NC_009525.fq NC_009565.fq NC_012943.fq N +C_016768.fq NC_016934.fq NC_017026.fq NC_017522.fq NC_017 +523.fq NC_017524.fq NC_017528.fq NC_018078.fq NC_018143.f +q NC_020089.fq NC_020559.fq NC_021054.fq NC_021192.fq +NC_021193.fq NC_021194.fq NC_021251.fq NC_021740.fq NC_02 +2350.fq (3R)-hydroxyacyl-ACP dehydratase subunit HadA 0 0 0 0 0 + 0 0 0 0 0 0 0 0 0 0 0 1 0 +0 0 0 0 (3R)-hydroxyacyl-ACP dehydratase subunit HadB 0 0 0 0 0 + 0 1 0 0 0 0 0 0 0 0 0 0 0 +0 0 0 0 (dimethylallyl)adenosine tRNA methylthiotransferase 1 1 1 +0 0 1 0 0 0 0 0 0 0 0 0 0 0 + 0 0 0 0
the result should print 1 if the filename matches else print 0