I am trying to write a script to find the lowest common ancestor for a list of ids

I have a file with the parent of each id, and have parsed this into a Hash containing the parent of every id %HoPar. This code not shown, but working properly

Then I am making an array of ancestors for each id. Then in a final step I am comparing all of these ancestor arrays to find the intersection. This is where I am having problems, I'm not sure of the syntax to create the List::Compare object. Any help appreciated

my %HoAncestors; foreach my $qu (keys %HoTxHits) { # go through each taxid, get ancestors, then find the intersec +tion foreach my $taxid (@{$HoTxHits{$qu}}){ my $queryTaxid=$taxid; while ((exists $HoPar{$queryTaxid}) && ($HoPar{$queryT +axid} != 1)) { my $parent=$HoPar{$queryTaxid}; push (@{$HoAncestors{$taxid}},$parent); $queryTaxid=$parent; } } $lcm=List::Compare=>new(\ @intersection=$lcm->get_intersection; } }

In reply to Passing List::Compare a list of arrays by AWallBuilder

Title:
Use:  <p> text here (a paragraph) </p>
and:  <code> code here </code>
to format your post, it's "PerlMonks-approved HTML":



  • Posts are HTML formatted. Put <p> </p> tags around your paragraphs. Put <code> </code> tags around your code and data!
  • Titles consisting of a single word are discouraged, and in most cases are disallowed outright.
  • Read Where should I post X? if you're not absolutely sure you're posting in the right place.
  • Please read these before you post! —
  • Posts may use any of the Perl Monks Approved HTML tags:
    a, abbr, b, big, blockquote, br, caption, center, col, colgroup, dd, del, details, div, dl, dt, em, font, h1, h2, h3, h4, h5, h6, hr, i, ins, li, ol, p, pre, readmore, small, span, spoiler, strike, strong, sub, summary, sup, table, tbody, td, tfoot, th, thead, tr, tt, u, ul, wbr
  • You may need to use entities for some characters, as follows. (Exception: Within code tags, you can put the characters literally.)
            For:     Use:
    & &amp;
    < &lt;
    > &gt;
    [ &#91;
    ] &#93;
  • Link using PerlMonks shortcuts! What shortcuts can I use for linking?
  • See Writeup Formatting Tips and other pages linked from there for more info.