I need to pars an xmlfile,using perl. So basically I want to convert this xml file to some data structure like hashes and arrays.by this code now I can have access to the all nodes except for graphics node and its elements.

XML file:

<pathway name="path:ko00010" org="ko" number="00010" title="Glycolysis / Gluconeogenesis" image="http://www.kegg.jp/kegg/pathway/ko/ko00010.png" link="http://www.kegg.jp/kegg-bin/show_pathway?ko00010"> <entry id="13" name="ko:K01623 ko:K01624 ko:K01622 ko:K16306" link="http://www.kegg.jp/dbgetbin/www_bgetK01623+K16306"> <graphics name="K01623..." fgcolor="#000000" bgcolor="#BFBFFF" type="rectangle" x="483" y="404" width="46" height="17"/> </entry> </pathway>

here is the perl code :

+ + + + use XML::LibXML; use strict; use warnings; my $parser = new XML::LibXML; my $xmlp= $parser -> parse_file("ko00010.xml"); my $rootel = $xmlp -> getDocumentElement(); my $elname = $rootel -> getName(); my @rootelements=$rootel -> getAttributes(); foreach my $rootatt(@rootelements){ my $name = $rootatt -> getName(); my $value = $rootatt -> getValue(); print " ${name}[$value]\n "; } my @kids = $rootel -> childNodes(); foreach my $child(@kids) { my $elname = $child -> getName(); my @atts = $child -> getAttributes(); foreach my $at (@atts) { my $name = $at -> getName(); my $value = $at -> getValue(); print " ${name}[$value]\n "; } }

In reply to Parsing xml using libXML by shaq

Title:
Use:  <p> text here (a paragraph) </p>
and:  <code> code here </code>
to format your post, it's "PerlMonks-approved HTML":



  • Posts are HTML formatted. Put <p> </p> tags around your paragraphs. Put <code> </code> tags around your code and data!
  • Titles consisting of a single word are discouraged, and in most cases are disallowed outright.
  • Read Where should I post X? if you're not absolutely sure you're posting in the right place.
  • Please read these before you post! —
  • Posts may use any of the Perl Monks Approved HTML tags:
    a, abbr, b, big, blockquote, br, caption, center, col, colgroup, dd, del, details, div, dl, dt, em, font, h1, h2, h3, h4, h5, h6, hr, i, ins, li, ol, p, pre, readmore, small, span, spoiler, strike, strong, sub, summary, sup, table, tbody, td, tfoot, th, thead, tr, tt, u, ul, wbr
  • You may need to use entities for some characters, as follows. (Exception: Within code tags, you can put the characters literally.)
            For:     Use:
    & &amp;
    < &lt;
    > &gt;
    [ &#91;
    ] &#93;
  • Link using PerlMonks shortcuts! What shortcuts can I use for linking?
  • See Writeup Formatting Tips and other pages linked from there for more info.