There are many ways to do this. I would propose a repeated split instead of a regex. First split on ][, then for each of the results split on |, take the fourth element and split that on +. Sounds more complicated than it is:
use strict;
use warnings;
use Data::Dumper;
my $data = '[-3|1|29x250+46+26|200+300+464|Get][-3|1|29x250+46+26|132+
+100+244|come][-3|1|29x250+46+26|220+124+432|Go]';
my @splitted = map { [ split /\+/, (split /\|/)[3] ] } split /]\[/, $
+data;
print Dumper \@splitted;
As a result you get
$VAR1 = [
[
'200',
'300',
'464'
],
[
'132',
'100',
'244'
],
[
'220',
'124',
'432'
]
];
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