Do you have any reasons for converting to an .exe? A slight update to bioperl was released (1.6.922) that should make it easier to install with strawberry perl, which should mean you can run this directly (and pretty easily at that).

Bioinformatics

In reply to Re: perl to exe excutable file to work on windows (seven /xp) by bioinformatics
in thread perl to exe excutable file to work on windows (seven /xp) by Samman_Mahmoud

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