You might also consider using the three argument form of open:

open(my $in, '<', "/Users/Desktop/Pipelines/fungi.1.aa.hypothetical.fa
+a");
open(my $out, '>', "Users/Desktop/Pipelines/fungi.1.aa.hypothetical50.
+faa");

[download]

*My* tenacity goes to eleven...

In reply to Re: Parsing Sequence Records by thezip
in thread Parsing Sequence Records by lomSpace

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