Dear friends,
somewhere in my code I construct a HoA, based on the following snippet:
my %HoA_total_hits=();
while(<>)
{
my @split_hit_total = split(/\s+/, $hit_total);
my $pfam_ac_hit = $split_hit_total[1];
my $protein_ac = $split_hit_total[3];
my $iEvalue = $split_hit_total[12];
my $seq_start = $split_hit_total[19];
my $seq_end = $split_hit_total[20];
my $range_b=$seq_start.'-'.$seq_end;
push @{ $HoA_total_hits{$protein_ac} }, $range_b;
}
My question is, assuming I have more than one hits for the same $protein_ac, how would I go in order to add in the HoA only one range, the one that has the lowest $iEvalue? Somehow I must compare the $iEvalue of all hits for the same $protein_ac (if more than one) and keep only one of them.
Thank you!
Posts are HTML formatted. Put <p> </p> tags around your paragraphs. Put <code> </code> tags around your code and data!
Titles consisting of a single word are discouraged, and in most cases are disallowed outright.
Read Where should I post X? if you're not absolutely sure you're posting in the right place.
Please read these before you post! —
Posts may use any of the Perl Monks Approved HTML tags:
- a, abbr, b, big, blockquote, br, caption, center, col, colgroup, dd, del, details, div, dl, dt, em, font, h1, h2, h3, h4, h5, h6, hr, i, ins, li, ol, p, pre, readmore, small, span, spoiler, strike, strong, sub, summary, sup, table, tbody, td, tfoot, th, thead, tr, tt, u, ul, wbr
You may need to use entities for some characters, as follows. (Exception: Within code tags, you can put the characters literally.)
| |
For: |
|
Use: |
| & | | & |
| < | | < |
| > | | > |
| [ | | [ |
| ] | | ] |
Link using PerlMonks shortcuts! What shortcuts can I use for linking?
See Writeup Formatting Tips and other pages linked from there for more info.