Dear All, I am trying to generate multiple strings of DNA based on certain rule.
The string length will be of 10 bases based on C)2 N3(A|G)4-6 N7 T8(A|T)9(A|T)10 where N could be (A or T or G or C).
So according to the above rule, 1st and 2nd position could be a combination of (GG or GC or CG or CC) followed by (A or T or G or C) at position 3 followed by a combination of (AAA or AAG or AGG .. and so on).
The thing which I am not able to figure out is do I need to put lot of for loops to do it or is there any short way using perl.
Thank you for any help or suggestions.

In reply to Multiple string generation by newtoperlprog

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