Probably a ridiculously easy problem to fix but I am losing what little hope and hair I have left in trying to get it running

This line of code produces the error below 

 my $out=();
        $out = Bio::AlignIO->new(-file => $array[3], -format => 'fasta
+');

[download]

------------- EXCEPTION: Bio::Root::Exception -------------
MSG: Could not read file 'X.fasta': No such file or directory
STACK: Error::throw
STACK: Bio::Root::Root::throw
/home/depledge/perl5/lib/perl5/Bio/Root/Root.pm:449
STACK: Bio::Root::IO::_initialize_io /home/depledge/perl5/lib/perl5/Bio/Root/IO.pm:270
STACK: Bio::AlignIO::_initialize /home/depledge/perl5/lib/perl5/Bio/AlignIO.pm:401
STACK: Bio::AlignIO::new /home/depledge/perl5/lib/perl5/Bio/AlignIO.pm:311
STACK: Bio::AlignIO::new /home/depledge/perl5/lib/perl5/Bio/AlignIO.pm:332
STACK: GetSubSequence.pl:72
-----------------------------------------------------------

In reply to Bio::AlignIO help needed... by HelplessEskimo

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