Thanks for your feedback (which has been acknowledged in pod) and let me know if you need or discover something else,

To have a mention in the gitworld is quite gratifying. Maybe all of this work going through _Intermediate Perl_ is starting to pay-off.

I have thoroughly enjoyed replicating your work and wish that I could get it all. Sometimes they are over my head. I have many of the same questions that I've had for a while now, and this might showcase how to answer a couple of them categorically.

Let's start the usual way:

$ pwd
/home/bob/Documents/meditations/Algorithm-Markov-Multiorder-Learner-ma
+ster
$ perl Makefile.PL 
Checking if your kit is complete...
Warning: the following files are missing in your kit:
    .BACKUP/28.06.2019_13.28.tgz
    data/2.short.shelley.txt
    data/ShelleyFrankenstein.txt
...
    states/small.fa.state
Please inform the author.
Generating a Unix-style Makefile
Writing Makefile for Algorithm::Markov::Multiorder::Learner
Writing MYMETA.yml and MYMETA.json

[download]

So there's ten files or so that we get warnings for their absence. If I'm to guess, you might struggle with how much of an example file to leave for the distribution. I think data/2.short.shelley.txt in its 2 paragraphs is perfect. The entire shelley text is probably too much. I must say, it is a great text to work with. Let me say this though, without an existing data/2.short.shelley.txt , your test fails.

My BIG QUESTION about these distributions has been "where do you put the data?" If I put it in a place so that the install test passes as one would expect from such source:

$ pwd
/home/bob/Documents/meditations/Algorithm-Markov-Multiorder-Learner-ma
+ster/t
$ cat 01-learn-text.t 
#!/usr/bin/env perl

use strict;
use warnings;

use lib 'blib/lib';

use Test::More;
use Algorithm::Markov::Multiorder::Learner;

my $num_tests = 0;

my $input_corpus_filename = 'data/2.short.shelley.txt';
...

[download]

Then I can't figure out how to do the paths on the command line. Consider this the base:

$ pwd
/home/bob/Documents/meditations/Algorithm-Markov-Multiorder-Learner-ma
+ster
$ ls
bin   Changes  lib       Makefile.PL  MYMETA.json  output      README 
+ xt
blib  data     Makefile  MANIFEST     MYMETA.yml   pm_to_blib  t
$ cd data
$ ls
 1.mp.txt              2.short.shelley.txt      'Untitled Document 1'
 1.pope.txt            3.Shelley_short.txt
 2.Shelley_short.txt   ShelleyFrankenstein.txt

[download]

Our files are in a child directory named data .

$ cd ..
$ pwd
/home/bob/Documents/meditations/Algorithm-Markov-Multiorder-Learner-ma
+ster
$ cd blib/
$ cd script/
$ pwd
/home/bob/Documents/meditations/Algorithm-Markov-Multiorder-Learner-ma
+ster/blib/script
$ ls
analyse_DNA_sequence.pl  analyse_text.pl   predict_text.pl

analyse_image.pl         predict_image.pl  read_state.pl
$

[download]

Meanwhile our scripts are in a grandchild directory. And this per the makefile:

cp bin/analyse_text.pl blib/script/analyse_text.pl
"/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/an
+alyse_text.pl

[download]

Am I correct that this script needs to be run in

Algorithm-Markov-Multiorder-Learner-master/blib/script

Forgive me if I missed this, but can you lay out an example that works for invoking analyse_text.pl ?

In reply to Re^9: n-dimensional statistical analysis of DNA sequences (or text, or ...) by Aldebaran
in thread n-dimensional statistical analysis of DNA sequences (or text, or ...) by bliako

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